CI01000043_04292518_04294909


Basic Information

Item Value
gene id CI01000043_04292518_04294909
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 4292183 ~ 4294909 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000043_04292518_04294909.mRNA
ATGGATACGCGCGGGTTTAGGGCGATGTTACTAACGATATCCGATAAACTTACTGAGGATAATGTGGTGAGTTTAAAGTTTTTGTGCTTAGACATCGGGAAGAAAAGGCTTGAGAAAATCAACAAGGGTTTTGATCTTTTCGAGTGCTTGATCGAAAGAGCTCAAATAGGGCCTGATAACACGGACCTTTTGCGAAAACTTCTGAACGACATCGGTCAGACAGTTCTTCTTGAAATAGTAGAGGATTATGAGAGACAAGCGGCTAGACCCGCTGATGGACTGGATGCGAAAGAGAGAGAAAAAATAAACATTGCAACTGATGTAATTGTTGAACATCTGGGTAAAAAGTGGCTTCAAGTTGGAAGAAAACTTGGACTTCAAGACACTCAGCTGGAAGCCATCCAAGAGAAACACAGCCGTGACCTGGAGGAGCAGGTGAGGGAGCTCATCAGACAGTGGATGAAGATCAAGAAAGTAAACGCCAGAGTGGAGGACCTCATCAAAGCTCTGCGAGACTGCAAACAAAACCTCACCGCTGATCTTGTGGAGAAAAAACTCAGAGAGCGCGGTATACCTTGAACATCACCACACCTCCTCCATTTTTGTCTGTTTTTGGAAACTGTTGTACTACAAAAGGAAAGAGCTTTGGGATTAATAATGTGAATTTCCTTTTAAAGTGCAAATGAACTGAATTGTCTATGGTTGATTGTTTACAGATCTTGAATTAATTTTTGGTGAACATTTGTTAATTGAAAACCATTAGATAATATATTTCGAAATGATTATATTCCAGAAAATGAAATATATTGATTGGTAATTTTGCAGTTTTTACAGAACATAGTCATCATGCAACACTGTTCTTGTATTTACTGATTTTGTGAAAAGAATCTAGTCATGTGACACAAATGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000043_04292518_04294909.mRNA True 914 mRNA 0.39 2 4292183 4294909

Neighbor

gene id symbol gene type direction distance location
CI01000043_04185319_04204509 CSNK1G1 coding downstream 87142 4185108 ~ 4205041 (-)
CI01000043_04168896_04172758 RS17, RPS17.S, RPS17 coding downstream 119425 4168871 ~ 4172758 (-)
CI01000043_03912564_03929022 CHRNA7 coding downstream 363161 3911926 ~ 3929022 (-)
CI01000043_03782397_03783190 NA coding downstream 508058 3781312 ~ 3784125 (-)
CI01000043_03750004_03772251 NA coding downstream 519677 3749842 ~ 3772506 (-)
CI01000043_04297368_04337304 NA coding upstream 1915 4296824 ~ 4337304 (-)
CI01000043_04486893_04491014 CCND1.L, CCND1, CCND1.S coding upstream 191692 4486601 ~ 4491988 (-)
CI01000043_04701996_04719324 TPCN2 coding upstream 407087 4701996 ~ 4719324 (-)
CI01000043_04725324_04728884 NA coding upstream 430160 4725069 ~ 4728884 (-)
CI01000043_04738890_04742485 NA coding upstream 443981 4738890 ~ 4743454 (-)
G191941 NA non-coding downstream 322841 3966947 ~ 3969342 (-)
G191938 NA non-coding downstream 333224 3958727 ~ 3958959 (-)
G191937 NA non-coding downstream 333620 3958336 ~ 3958563 (-)
G191932 NA non-coding downstream 348185 3943779 ~ 3943998 (-)
G191929 NA non-coding downstream 364704 3927266 ~ 3927479 (-)
G192118 NA non-coding upstream 57975 4352884 ~ 4353110 (-)
G192126 NA non-coding upstream 86623 4381532 ~ 4381735 (-)
G192138 NA non-coding upstream 105037 4399946 ~ 4400234 (-)
G192163 NA non-coding upstream 130557 4425466 ~ 4425793 (-)
G192243 NA non-coding upstream 244785 4539694 ~ 4540445 (-)
G191296 NA other downstream 1242319 3048372 ~ 3049864 (-)
CI01000043_02245322_02249390 GABARAPL1, GABARAP.L, GABARAP, GABARAPA, GABARAPB, BRAFLDRAFT_122660, GBRAP other downstream 2042703 2244688 ~ 2249480 (-)
G189881 NA other downstream 3409015 814747 ~ 883168 (-)
G192109 NA other upstream 37002 4331911 ~ 4332726 (-)
G192980 NA other upstream 1161588 5456497 ~ 5458414 (-)
G192947 NA other upstream 1298772 5593681 ~ 5618440 (-)
G193313 NA other upstream 1960663 6255572 ~ 6256279 (-)
G193922 NA other upstream 2268431 6563340 ~ 6566039 (-)

Expression


Co-expression Network