CI01000043_04471833_04474152


Basic Information

Item Value
gene id CI01000043_04471833_04474152
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 4471629 ~ 4474518 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000043_04471833_04474152.mRNA
ATATATAACCAATCTCACTTTTATTTTGATCAAGTAAACATTGTGATATGAACCTTACTTTAGTTTAGTTTCCCTTCCAGAAGACGGCGCCGTGGTTCAGCCACATCGATGCCAAACACAGAAGAAGCGAAGAAGAGCGACTCCGGAAATTAGTAACCATCAGAAAAGACTTCGGGATAGAAAACCAAATCGTTTTATGTAAAAATGGCTTTTGTGTCCAATAGTGATGATTTATTTGACTCCATTATCATGGCCGATAACAGGTTTCGTGTTGAAGGTTATCAGGAAGGGTTTGAGGAGGGAACTCGACAGGGAACCTTCGAGGGTCGAAACCACGGGCGGCTGCACGGAGCCAAACTCAGTGCTGAGGTGTCTTTTTATTATGGATTTGCTCTTGCATGGAAATGTCTTCTTCAAAACAACAGTGATGTTAAAGCAAGAGTTTCTCCTAGAAAAAGGCTGAAAGCTATGGAGTCTTTGATAGCAGTGATCCAGAACTTCCCATACGAAGACCCTCAGTATGAGAAACTTCAGGAGGATATGGAAAGAGTGCGTGCCAAATTTAGACAGACAGCCGCTCCTGATGACGGTTGGTGTTCACATGGAGTCAGTGTGTACAGGAGTGGACCGTCATCACTCTCACTGGATTCGTACGGCAGAATTCTGGAGCAGTTCTTAATACTGAATCCTAGACACTGAATGGAAGAGTTTGAGTGGTATTCTTAGGAGTTTGGTGGTTTTGAAGTGAGATATAAAGGGTTGCAATGGCAGTATTATGAGTCGATTTAATATACAAGACAAATCACTGTCTTTTATAAGAATATTCTTTCTTGCAAAATGATTTTTAATATTTTTAACCCTTCAGGTGTGCAGAAGAATGGCCTTATTGTGCATACAAAGGTGTATTTCTGCATTTTTAATGGACTGCTGTTCAAAGAAGAAGAGTATAAACTCCATCTTGTGGTGAAATTGGAGAATTGTTCTTGCAGTTAGGTGGCTCCGCCTGCTGGTGAACTGCAAGTACAGCAGGGTTGTCACTTGAATTAGAATGAATTAAAATCAGTA

Function

NR:

description
Oral cancer overexpressed protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000043_04471833_04474152.mRNA True 1065 mRNA 0.41 5 4471629 4474518

Neighbor

gene id symbol gene type direction distance location
CI01000043_04465956_04468671 NA coding upstream 1453 4465848 ~ 4470176 (+)
CI01000043_04450220_04453014 FGF4 coding upstream 17764 4449928 ~ 4453865 (+)
CI01000043_04440501_04442850 FGF3 coding upstream 27964 4440357 ~ 4443665 (+)
CI01000043_04366197_04369516 NA coding upstream 101633 4365421 ~ 4369996 (+)
CI01000043_04261984_04277105 PACSIN3 coding upstream 193640 4261984 ~ 4277989 (+)
CI01000043_04746456_04753978 DHCR7 coding downstream 271504 4746022 ~ 4754364 (+)
CI01000043_04813811_04816237 NA coding downstream 338845 4813363 ~ 4816743 (+)
CI01000043_04818939_04819238 NA coding downstream 344421 4818939 ~ 4820669 (+)
CI01000043_04873413_04879547 NA coding downstream 398895 4873413 ~ 4879602 (+)
CI01000043_04887448_04901355 NA coding downstream 412930 4887448 ~ 4901687 (+)
G191779 NA non-coding upstream 25557 4445773 ~ 4446072 (+)
G191754 NA non-coding upstream 75552 4395848 ~ 4396077 (+)
G191752 NA non-coding upstream 77852 4393566 ~ 4393777 (+)
G191643 NA non-coding upstream 148572 4295512 ~ 4323057 (+)
G191650 NA non-coding upstream 277971 4184368 ~ 4193658 (+)
G192223 NA non-coding downstream 50797 4525315 ~ 4525514 (+)
G192250 NA non-coding downstream 72091 4546609 ~ 4546940 (+)
G192257 NA non-coding downstream 83952 4558470 ~ 4558883 (+)
G192258 NA non-coding downstream 84402 4558920 ~ 4559124 (+)
G192267 NA non-coding downstream 90053 4564571 ~ 4564929 (+)
G191644 NA other upstream 121015 4307948 ~ 4350614 (+)
G191670 NA other upstream 561663 3903233 ~ 3909966 (+)
G190272 NA other upstream 2027919 2441862 ~ 2443710 (+)
G190241 NA other upstream 2779150 1683556 ~ 1692479 (+)
G192454 NA other downstream 518495 4993013 ~ 4993356 (+)
CI01000043_05114193_05114497 BOLA3 other downstream 639368 5114193 ~ 5114497 (+)
CI01000043_05169578_05171795 CLEC3A other downstream 695087 5169578 ~ 5171848 (+)
G192489 NA other downstream 992799 5467317 ~ 5552624 (+)
G193125 NA other downstream 1731170 6205688 ~ 6210893 (+)

Expression


Co-expression Network