CI01000043_04818939_04819238


Basic Information

Item Value
gene id CI01000043_04818939_04819238
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 4818939 ~ 4820669 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000043_04818939_04819238.mRNA
ATGGAAGAGCTTTTATGTCTGATTAACTCTCCTCCAAATCTCCTCGGACGACAGGAGCACTACGAGGAGGGGCGGATCGCCTGGCAACGGTATTCGGTGGGATTCATCAGTGACAGCATTCCGATCATGACTGTCCTGCGTCTCCTCTACTCTTCCAATAATATTTATCAAAGTGCTTTCTGCTCTACCTTGTCTGACAGAGCAATATTTATAATACCACTCACTTTCGTTCTCTCCTCTACGTCTACCTCTTCTGCTACAAAAGGAGGTACTCTCTCGCTGATTGCGAAGGGTAAATGACTGAGATTTTGTCAGAGGCACTTTAAAAAGTGGCAGCGGTTTGTTTTTCAATGCCTTCCGTGTCCTAGTATACTAGCTGTGTTTATGTAGATTAGACATAAGACTAAGCAAACACCACAGAAAGCAAACACAGACCTACCTGACAGCAGTTATATCTTACAACGTTAGGAAACTTGCCTAATTTGTCTATTTTGCCTAGTAGATCACATCAGCATGAATAAGTCGTGAATGAAACAGGGATCCTATTTCCTCTGCTGGTCAAGGAATGCGCTCCAAAAATAACTGGCAGTGGACCTTGGCAATGTGGGCCATGGGACTGTGTGCCAACAAGCTCTCATATAGGGATGGCATTGCTACACACGCTATCTACCAAGCGGCTCAAGCTTAGGCCAAAAATATACTCTAAGCAAGTATGCTAACGCAGATGTCAATGCGAGACCAATGCACTGCAAAGTGCATTGGTCTCGTCGGCGGATACACTTAATGTGCATTGGTATTCAAAACTTAGTACTCAAGGCGAGGCAATGGAGTTACCTTCAAATGTCAAGTATCATTAAATGTTTTATTCAGGTAGCTAGCTAGAAACATGTCTACAGTTTAACTAAAACTTGCTCAGCAAGATTCTCAAACTGTTGCTTCCTGGCAGTAATCGAATATCTGGCCATGGATGAAAAATTCATTCTTGGTTGTGGAGGAAGTCACCATTATGTTTACACTAATGTCTGATATAGCGCCCCTTGAGGCAATTCTGAGAATGCAGCACATAAAATTGAGACGACTAAATTATATATGATCTCATACTTGTGTACGTTTCAGCCTTCGAGAGGGCGCTTGCAATGGGTTTAACCTACTCCCGCCTGTTTGTTTCTTACACCCCCACCCCTAAAATATCCCCATCACTGTAATACAATCTAGTTCAGACTCTACTAACACACTTTAAGCCCTTTCGCAAAGACTTAAGATATAAGGTTTCTGCATCTTCACCCTTTCCTTTTGAACTCACAGTTGTCCCTGCTTTTTTCCCCTCTCGTCTCAGCCCACCTCTAAGTGATATTTCTTTGTTAGGGAGAGCTTTGGGTTTGGGTAGAAGGAGGTTACCAATGGCTTTCACCCCCTGCTGTTTTTTTAAATTAGACTATTACCTAACATTCCCTACAACAGTGGGCCCCTACTAAGGCTTTTATTTATAATTAGGCCCCAAGAAGCTTTTTTCAAGTGTATTTTACTGAGTTTTAAATGGTGTACACTAGTGGTATGTATTTTATAGTTCTATTTTTCATATTTTCATTTGATTGAACAATGTAAAGCTATTATATAAATATAAACTCAGCAAATGGCTCCAGCACCAGCAAACGTACAATCTCTCTCAATGCCTCGAGCTTTTTCAAACCCCCTTAATGAAACCAACCGAAATGTTATGCTTCTCAGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000043_04818939_04819238.mRNA True 1731 mRNA 0.42 1 4818939 4820669

Neighbor

gene id symbol gene type direction distance location
CI01000043_04813811_04816237 NA coding upstream 2196 4813363 ~ 4816743 (+)
CI01000043_04746456_04753978 DHCR7 coding upstream 64575 4746022 ~ 4754364 (+)
CI01000043_04471833_04474152 NA coding upstream 344421 4471629 ~ 4474518 (+)
CI01000043_04465956_04468671 NA coding upstream 348763 4465848 ~ 4470176 (+)
CI01000043_04450220_04453014 FGF4 coding upstream 365074 4449928 ~ 4453865 (+)
CI01000043_04873413_04879547 NA coding downstream 52744 4873413 ~ 4879602 (+)
CI01000043_04887448_04901355 NA coding downstream 66779 4887448 ~ 4901687 (+)
CI01000043_04902104_04912376 NA coding downstream 81435 4902104 ~ 4912376 (+)
CI01000043_05025912_05042461 IPO7 coding downstream 205243 5025912 ~ 5042676 (+)
CI01000043_05088157_05094871 BCO1L coding downstream 267488 5088157 ~ 5095162 (+)
G192356 NA non-coding upstream 54285 4764183 ~ 4764654 (+)
G192327 NA non-coding upstream 124555 4694066 ~ 4694384 (+)
G192323 NA non-coding upstream 129860 4688831 ~ 4689079 (+)
G192322 NA non-coding upstream 131812 4686847 ~ 4687127 (+)
G192321 NA non-coding upstream 132124 4686606 ~ 4686815 (+)
G192416 NA non-coding downstream 59530 4880199 ~ 4880508 (+)
G192455 NA non-coding downstream 174240 4994909 ~ 4995144 (+)
G192461 NA non-coding downstream 186757 5007426 ~ 5007733 (+)
G192373 NA non-coding downstream 226524 5047193 ~ 5050199 (+)
G192466 NA non-coding downstream 233526 5054195 ~ 5054424 (+)
G191644 NA other upstream 468325 4307948 ~ 4350614 (+)
G191670 NA other upstream 908973 3903233 ~ 3909966 (+)
G190272 NA other upstream 2375229 2441862 ~ 2443710 (+)
G190241 NA other upstream 3126460 1683556 ~ 1692479 (+)
G192454 NA other downstream 172344 4993013 ~ 4993356 (+)
CI01000043_05114193_05114497 BOLA3 other downstream 293217 5114193 ~ 5114497 (+)
CI01000043_05169578_05171795 CLEC3A other downstream 348936 5169578 ~ 5171848 (+)
G192489 NA other downstream 646648 5467317 ~ 5552624 (+)
G193125 NA other downstream 1385019 6205688 ~ 6210893 (+)

Expression


Co-expression Network