CI01000043_05025912_05042461 (IPO7)


Basic Information

Item Value
gene id CI01000043_05025912_05042461
gene name IPO7
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 5025912 ~ 5042676 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000043_05025912_05042461.mRNA
GTGTGATCTACCTGAAGAACATGGTGACACAGTACTGGAGTGAAGGAGATAGTGCAAACACTGAAGCGCCTACCAGTAACATCCCCGAAGAGGACAGGCAGTTCATTCGAGACAACATAGTGGAGGCCATCATCCAATCCCCAGAGCGCATCAGAGTGCAACTCACAACTTGCATTCACCACATGATCAAGCACGACTACCCCAGTAGATGGACGGCTATCGTGGACAAGATCGGCTTTTACCTGCAGTCTGACAACAGTGCATGCTGGCTGGGCATCCTGCTGTGCCTCTACCAGCTGATCTTCATGCCCATGCTGAAGGACCGATTCATACAGCTTCTGCCAGACCCCTCTGGCGACTCTGCCCTGGTTCAGAAACAGATCTTTAAGATCCTTTATGCTCTCTTCCAGTACAACCTCCCTCTGGAGCTGATCAATCGCCAGAATCTGACTGAGTGGATGGAGATTCTGAAGACCGTCGTGGACAGAGATGTTCCTCCAGAGACACTTCAGGTGGATGAAGACGAGAGGCCCGAGCAGCCCTGGTGGAAGTGCAAGAAGTGGGCGCTTCACATCCTCGCCCGGCTCTTCGAGAGGTATGGCAGCCCTGGCAACACAACCAAAGAGTACACAGAGTTTGCAGAGCTTTTCCTCAAGGGTTATGCCGTGGCTGCACAGCAGGTACTGTTGAAGGTGTTGTATCAGTATAAGGAAAAGCAATACGTGGCTCCTAGAGTCTTGCAGCAGACACTGAATTACATCAACCAGGGAATCGCACACGCCGTCACCTGGAAGAACCTAAAGCCACACATACAAGGAATCATTCAGGATGTGGTGTTCCCTCTCATGTGCTACACAGACAGTGATGAAGAGCTCTGGCAGGAAGACCCTTATGAGTACATCCGCATGAAATTTGATGTTTTTGAAGACTTCATCTCCCCAACCACAGCAGCTCAGACGCTTCTCTTCACTGCTTGCAACAAAAGGAAGGAGGTGCTGCAGAAGTCCATGGGCTTCTGTTATCAGATCCTCACTGAACCCGCCTCTGACCCCAGGAAAAAAGACGGTGCTCTTCATATGATCGGCTCACTGGCTGAGATTCTTCTCAAGAGGAAGATCTACAAAGACCAGATGGAGTTCATGTTGCAGAATCACGTCTTTCCTCTGTTCCGCAGTGAGCTGGGTTACATGAGAGCCAGGGCCTGCTGGGTGCTTCATTACTTCTGCGAGGTCAAGTTCAAGAATGACCAGAACTTGCAGACGGCCCTCGAGCTCACCCGCCTGTGTCTGATCAACGACAACGAGATGCCTGTTAAAGTGGAGGCTGCCATCGCCCTCCAGGTCCTCATCAGCAATCAGGAGAAAGCCAAAGATTACATCACCCCCCACATCCGGCCCGTGATGCAGGCCCTCCTCCAAATCGTGCGTGAGACTGAGAATGACGATCTTACCAATGTCATCCAGAAGATGATCTGTGAGTACAGTGAGGAGGTCACCCCAATCGCTGTGGAGATGACTCAGCATTTGGCCATGACCTTCAACCAAGTGATCCAGACAGGGCCTGATGAGGAAGGAGGTGATGATAAAGCAGTGACCGCCATGGGCATCCTCAACACCATTGACACACTGCTGAGTGTAGTGGAGGACCATAAAGAGATTACCCAGCAGTTAGAGGGCATTTGTCTGCAGGTGATCGGCACAGTCCTGCAGCAGCACGTTCTTGAGTTCTACGAGGAGATCCTGTCCCTGGCCCACAGTCTGACATGTCAGCAGGTGTCTCCTCAGATGTGGCAGCTGCTCCCTCTGGTCTATGAGGTCTTCCAACAAGACGGATTTGACTATTTCACAGATATGATGCCACTTCTCCATAACTACATCACAGTTGACACAGACACGCTCCTGTCTGACACCAAATACCTTGAAGTAATCTACAGTATGTGCAAAAAGATTTTGTCAGGAGACCCAGGAGAGGACCCAGAATGCCATGCGGCCAAGCTCTTGGAGGTCATCATTCTACAGTGCAAAGGTCGTGGTATTGACCAGGTGGTGCCCTTGTTTGTAACGACCGCTTTGGAGCGTTTGACGCGTGAAGTGAAGACCAGCGAGTTGAGGACCATGTGTCTGCAGGTGGCCATCGCTGCGCTCTATTACAGTCCTTCTCTGCTCCTCAACACGCTGGAGAATCTGCGCTTCCCCAACAACACCGAGCCCATCACCAACCACTTCATCTCCCAGTGGCTCAAAGACATCGACTGCTTCCTCGGGCTCCATGATCGAAAGATGTGCGTGTTAGGACTGTGTGCGCTCATGGATCTAGACCAGAGGCCACAGGCTGTTAATCAGGTCGCAGCGGAGTTGGGCAGTGATGAAGATGACATAGATGAAGAAGGCCAGGAATACCTTGAAATGCTAGCTAAACAAGCAGGAGAGGACGGTGGCGATGAAGACTGGGAAGAAGACGACGCAGAGGAGACCGCTCTCGAGGGTTACACGACCTCGGTGGACGACGAGGACAACCTCGTTGATGAATACCAGATCTTCAAAGCCATAATACAGAATGTCCAGGCCCGTGACCCAGCATGGTACCAGGCGCTCACACAATGTCTCGATGAGGAACAAAGAAAACAACTTCAGGATATTGCAACACTTGCTGATCAGCGGCGAGCAGCACATGAATCAAAGATGATCGAGAAGCACGGAGGATATAAGTTCACAGTTCCCGTGGTGCCATCCAATTTCAACTTTGGTGGCAGCGCCCCTGGGATGAATTGAGTCCTCTCTTCCCTCTTCCCCTTTCTAACTGTGACTGAATGTAGTGAAATGAAAACACTTGTGTTGCTCCCTGAAGTAGTGGTTCCAGAACTGGTTCTTCTCTCTCACTCTTCAATCTGACTATCAAATTTAAACAGCACCAGAAGATGTGGGAAAGCAACCAATGCCTGGGAAAACAAACCAAGAACTTGAACGCTAAGCAAGTGGGGGGGAAA

Function

symbol description
ipo7 Predicted to be involved in protein import into nucleus. Predicted to act upstream of or within intracellular protein transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytosol and nuclear envelope. Orthologous to human IPO7 (importin 7).

GO:

id name namespace
GO:0042393 histone binding molecular_function

KEGG:

id description
K20223 IPO7, RANBP7; importin-7

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000043_05025912_05042461.mRNA True 2986 mRNA 0.51 23 5025912 5042676

Neighbor

gene id symbol gene type direction distance location
CI01000043_04902104_04912376 NA coding upstream 113536 4902104 ~ 4912376 (+)
CI01000043_04887448_04901355 NA coding upstream 124225 4887448 ~ 4901687 (+)
CI01000043_04873413_04879547 NA coding upstream 146310 4873413 ~ 4879602 (+)
CI01000043_04818939_04819238 NA coding upstream 205243 4818939 ~ 4820669 (+)
CI01000043_04813811_04816237 NA coding upstream 209169 4813363 ~ 4816743 (+)
CI01000043_05088157_05094871 BCO1L coding downstream 45481 5088157 ~ 5095162 (+)
CI01000043_05099471_05111989 BCO1 coding downstream 53049 5095725 ~ 5112379 (+)
CI01000043_05114193_05114497 BOLA3 coding downstream 71517 5114193 ~ 5114497 (+)
CI01000043_05119129_05131257 VAT1L coding downstream 76453 5119129 ~ 5131257 (+)
CI01000043_05169578_05171795 CLEC3A coding downstream 126902 5169578 ~ 5171848 (+)
G192461 NA non-coding upstream 18179 5007426 ~ 5007733 (+)
G192455 NA non-coding upstream 30768 4994909 ~ 4995144 (+)
G192416 NA non-coding upstream 145404 4880199 ~ 4880508 (+)
G192385 NA non-coding upstream 197820 4811329 ~ 4828092 (+)
G192356 NA non-coding upstream 261258 4764183 ~ 4764654 (+)
G192373 NA non-coding downstream 4517 5047193 ~ 5050199 (+)
G192466 NA non-coding downstream 11519 5054195 ~ 5054424 (+)
G192469 NA non-coding downstream 13683 5056359 ~ 5056568 (+)
G192477 NA non-coding downstream 26662 5069338 ~ 5069553 (+)
G192478 NA non-coding downstream 28202 5070878 ~ 5071097 (+)
G192454 NA other upstream 32556 4993013 ~ 4993356 (+)
G191644 NA other upstream 675298 4307948 ~ 4350614 (+)
G191670 NA other upstream 1115946 3903233 ~ 3909966 (+)
G190272 NA other upstream 2582202 2441862 ~ 2443710 (+)
G190241 NA other upstream 3333433 1683556 ~ 1692479 (+)
G192489 NA other downstream 424641 5467317 ~ 5552624 (+)
G193125 NA other downstream 1163012 6205688 ~ 6210893 (+)
G193344 NA other downstream 1267476 6310152 ~ 6310538 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00007226 ipo7,LOC106587545,LOC106562356 coding CM030123.1 CM030123.1 7947714 ~ 7971575 (-)