CI01000043_07424769_07438909


Basic Information

Item Value
gene id CI01000043_07424769_07438909
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 7424769 ~ 7438920 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000043_07424769_07438909.mRNA
AGAATTGCCCGATGGCCAATCCGCCCATGGGCACACTAGATGGCGATGTTGAATACAGATTAACTTTCAGTAATTGTGATGGAAGAACAAGAACGCTCTTTCAGTCCTCTGACGAGTGGTTTGATGTGGACACGGATGGGACTGTAACGTTGAAGAGACAAGTCACTCTTCATGAAGGTCACAAGGTGTTTTCTGTGCACGCTTGGGACTCCAGTGGCAAGAAGCACACGATATCTGTCAGAGTTGAGAGTGTCCACCATCATGTGGACCATCATGAGGACCATCATGTGGACACAGTCATGAACATCTCCTCTCCACAGATGGAATCTCCTTCTGATGATCTGGTTCTGATGTTTCCAAAGTCTTCGACGGGTCTAAAGAGAGCAAAGAGAGGTTGGGTTATTCCTCCGTTCAATGTTCTTGAGAATAGCAGAGGTCCTTTCCCAATAAAGCTGGTCCAGATAAAGTCAGACATTTCTAGTGAAGCTCAGATGCAATACAGGATCACAGGTGAAGGAGCAGATCTGGACCCTAAGGGGACTTTCATTATAGAAAGATTATCAGGAAATCTGTTTGTGACTCGACCACTCGACAGAGAAAGAAAAGCTTCATACAGACTTGTAGCTCATGCTACTGGAGTTGATGTGAATATAGCAGAAAAGCCAATGGAAATTATTGTAAATGTGCTGGACCAAAATGATAATCATCCTGTTTTTACACAAAATCCATTCAATGGAAATGTTTCTGAAGCTGCTAAAATAGGTGATGAGTTTATGACAGTCACAGCCACTGATGCAGATGATCCAGAGACTGACAATGGTGTGATCAGTTACTCAATTGTCAAGCAAGATCCAGAATTGCCAAAACCAAACATGTTTGAAATCAACTCTGTTACTGGAGGAATTCGTGTGAATTCTGTAGGCTTGGACAAAGAGAAATGGTCCAAATACACTTTGACAGTTGTGGCTACTGACATGGAAGGAAAGGGTTATCCAACCACTGGCACAGCTGTTATTACTGTGACTGACAGCAATGATAACGCACCTCAGTTTGAGGAAACCTCGCAAACTGTATCTGTTCCAGAGAATAAAGTAGGGGCTGTAGTGGCCAAACTTACAGTTACTGATGAAGATGAAGAGGGATCTCCCGCCTGGTCAACTAAATATCGGATTATTAGCGGTGACAAGGGTGGGTTTTTCAGTGTCAGTACTGGACCCAGCCGGCTAGAGGGCATCATCACCACTGCAAAGGTACTGTGTGTTGCTCATGTGTTTGCACAGGCGATTGGTTGTGATGATTTAACTTTAGTAAAAGACACTTTCTTTTCCATTCAGCCTCTGGACTTTGAGAAGAACAAGCAATACATTCTGTCTGTGATTGTTGAGAACGATGATCCATTCGTCGGTGCTTTGGTCACTTCCACTGCCACAGTCACGGTGAATGTAGAAGATGTGAATGAGCCTCCAGAGTTTAATCCAAAGGAGAAGGTTATTTACAAACCTGAAGATTCACCGGTTGATTCTGAATTGGTTACTTATACAGCCACTGATCCAGACATTGGAAACCCACAGAAAATAATGTATAAAATTGTCAGTGATCCTGAAGGCTGGCTGAGTGTAAATCAAGACACTGGACTGATTAAAGTCAGGAAACTTATGGATAGAGAATCTTCCAGTGTCAAAGATGGCAAATACAGAGCTATCATTTTGGCTGTGGATGATGCAAGACTCAAATGGTCGAATCATCTGGTGGTGGTGGCCTTACGAATCCATGCACCAAAGAATGTGGCGCAAAGACAACCTCCAAACATCAGCTATTTATTCAACACTCAACATCTCCCGCTTAAAGCTCGTTGTCAGAAGGCAAAAGTAGTTTCCTTTAAAAGACCCAAG

Function

NR:

description
Si:busm1-71b9.3 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000043_07424769_07438909.mRNA False 1892 mRNA 0.43 11 7424769 7438920

Neighbor

gene id symbol gene type direction distance location
CI01000043_07418072_07421953 NA coding downstream 879 7417406 ~ 7423890 (-)
CI01000043_07363226_07372771 CTU2 coding downstream 51998 7363226 ~ 7372771 (-)
CI01000043_07251626_07257659 CDT1 coding downstream 166168 7250942 ~ 7258601 (-)
CI01000043_07200195_07201430 TRAPPC2L coding downstream 223339 7200119 ~ 7201430 (-)
CI01000043_06979174_07034928 ACSF3 coding downstream 389196 6979112 ~ 7035573 (-)
CI01000043_07464177_07486461 NA coding upstream 24835 7463755 ~ 7487144 (-)
CI01000043_07642034_07648935 NA coding upstream 202905 7641825 ~ 7649353 (-)
CI01000043_07697097_07700330 NA coding upstream 257676 7696596 ~ 7701211 (-)
G193907 NA non-coding downstream 881930 6540013 ~ 6542839 (-)
G193895 NA non-coding downstream 931134 6493393 ~ 6493635 (-)
G193863 NA non-coding downstream 1072413 6352117 ~ 6352356 (-)
G193862 NA non-coding downstream 1072748 6351776 ~ 6352021 (-)
G193861 NA non-coding downstream 1073027 6350314 ~ 6351742 (-)
G194116 NA non-coding upstream 53025 7491945 ~ 7724924 (-)
G194120 NA non-coding upstream 74943 7513863 ~ 7560313 (-)
G194109 NA non-coding upstream 92872 7531792 ~ 7730635 (-)
G194111 NA non-coding upstream 119055 7557975 ~ 7560676 (-)
G194183 NA non-coding upstream 119567 7558487 ~ 7561540 (-)
G193922 NA other downstream 858730 6563340 ~ 6566039 (-)
G193313 NA other downstream 1168490 6255572 ~ 6256279 (-)
G192947 NA other downstream 1806329 5593681 ~ 5618440 (-)
G192980 NA other downstream 1966355 5456497 ~ 5458414 (-)
G192109 NA other downstream 3092043 4331911 ~ 4332726 (-)

Expression


Co-expression Network