CI01000043_07452783_07459261


Basic Information

Item Value
gene id CI01000043_07452783_07459261
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 7452291 ~ 7459980 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000043_07452783_07459261.mRNA
GTATAAAAATACTGGCCTTCTGAAGTACCTCTGGCATCAAATGAAGGTGGCATGGAAAAAGGTCATCATACCAAAGGTATGGGGAAGGGCAGGAGGGATCCTCATTCCTAAGGAGAAGAGCTCCTTAAACATCAACCAGTTCCGCCCAGATCAGCCTGCTAAATGTTGAAGGGAAAATTTTCTTCAGCATTGTGGCTCAAAGGCTTTCGGTGTCCTTGCTGAAAAACAACTTTGTTGAAATCTCAGTGCAGAAGGCAGGGATAAGTGGCTTCTCAGGATGTTTGGAGCATGGAAGCATTATCTGACACTAGGTACAAACTGCCAAAAAGGAAAAGAAGGACCTGCATGTGGTTTTCCTTGACCTTGCCAACACCTTTGTGTCAGTGCCACACGAGATAATCTGGATGGCGTTCAACTTCTTCCCAGGACCTCCAGTTCTGCATCACTACACAGAACAGCACCTCAGCCTAGCAGCAACTGGAAACTGGAATAATGGCAGGATGCACAACTTCTCCCCTGGCATTCACCATTGCAATGGAGATGATTATTCGAGCATCACAATGGGTAGTTGGAGGAGAACGACTGGAGAATGGGTTGTGTCTTACCCCAATCAGGGTATATGTGGATGACATGAAGATCATATCAAATACAAATCCATGCACCAAATGCCTGCTGGATAAGCTCCAGGATAACATCAACTGGGCACAATTGAAGATCAAACCCAGTAAGTCCCGTAGCATCTCCATTGTTAAAGGCCAGCTCGCCAATGAGAGATTCTGCATCAATGGGGAGCCAATACCAACCATCCTTGAGAAACCCATCAAAAGCCTGGGTCGGTGGTATAATGCAGCCCTCAATGATGCCGAACAGTTGGAAAAACTCAGGCAGGACACAATCAGCGGCCTCAAACAGATCAAAAATGCAGCCCTTCCAGGCAAATTTAAGTTGTGGAAGTGGCTTGGGCTGCCAAGATGCATGAACAGTGTCGGACTGTATGGCAACGGAGCTCTCTCCTTGCCTATCTCTAAATCTGTCAAAGTACGGCTGGAGTTGACACTCACTGAGTCCCAGGATTCCTTGGTACCTGGTGCTGCTCCCACTTTGGCAACTGGGAGGAAATGGAAGCCGGGCGCAGCAGAAGCAGACATAAAGTCTGCCCTCAGACATCGGGATATAGTGGGGCATGTCCAACAGGGTAGGGGAGGCTTTGGGTTAGGAACAACAACACCAACATGGGAAAAGGCTACTCCAACCGAGCAGCGTCAAATGGTGGTGATGGAGACTATCCTCCAAAAGTCCCTGGCTCCATTAAATGCAGCCAGGGACTGGGAAATGCGAGTTGACTTAGACCAGAGACTCACTTTTCCACCAGCGATCGCTGTGACCAACCTGCGCCCAGACCTAGTGCTGTGGTCTATCTCCTCCCATTGCGTCTTCATTGTTGAGCTAACGGTCCCCTGGGAAGATGCCATCGATGAAGCATACGAAAAGAAAAAGCTGCGCTGTGCTACTTTGGCAGCTGAGGCAGAGAAAAGGAGCTGGAGCATGAAGGTGTGTCCAGTGGAGGCGGGAAACATCTACATAGCGGATTATGAAATACTGGATGGAGTGCCAGCATCCAGTACTCGGCACTATTTGACTGCACCCATCTGCCTGCTGTACAAAAACAGATTGGACCAAATTGTGCCAATTGCCATTCAGCTCAGTCAAAACCCTGGGGAAAAGAGCCCAATCTTTCTCCCAAGCGATAATGAATATGATTGGATGCTTGCCAAGATGTGGGTGAAATCTTCTGACTTCAATGTACACCAGTTGGTCACACACCTTCTCAAGACACATCTGATATCAGAGGTTTTTGAAATTGCCATGTACAGACAGCTCTCTGCAGTCCATCCTGTACACAAGTTACTGAAACCACATGTTCGTTTCACAATTGCAATCAATGCAGAGGCCCGTGAAAAGCTCGTCAGTGATGGCGGGGTCTTCAGCAAGATTAGTAGCATCGCTGGAGCTGAGATGGAGAAAGTGATTAAAAGAGCCATGGAGACTTTAACCTACGAGTCCCTGTGCTTCCCTGAGGCCATAAAAGCTCGAGGAATGGAAGATATACCCAAGTACTTTTATAGAGATGATGGCATGAAGATCTGGGAGGCAATAAACTGTTTTGTTTCTGCTGTGGTCGAGATCTACTATGACAGCGATGAAACGGTTCAAAAAGATGTGGAGATTCAAGAATTTGTTAAGGATGTTTCCTTTGGCATGAATAATTCTGACAAGTTTCCAAAGTCTCTGAAAACACGAGAGGAGCTAGCTGAGTACCTGACTGTTGTGATATTCACAGCTTCAGCACAACATGCTGCAGTCAACTTTGGACAATTTGACTGGTATGGCTGGATCCCCAACAGTCCTTCCACCATGCGCAAGCCGCCTCCCGAACAGAAGGGCCAAGTGGATTTGAAGTATATCATGGATAGTCTGCCTGACCGTGGATGTTCCAGCAAGGCTCTAGGAACAGTTTGGGCCCTCAGTCAGTTCCAGAAGAATGAGCTGTTCTTAGGCACGTATCCAGATATGTGCTTCACGGAGCAACCAGTGAAGGAAGCCATAAAGACTTTCCGCAAGAAACTGGATGAGGTGACCAACATCATCAAGAGCAGGAATGAGGAATTAACATTGGATTATTGTTATTTGTCCCCAGACAAAATCCCCAACAGTGTTGCAGTTTGACAAAATATTGCCAAGCCTAACCATAGTGTTCACGGCCAATGTGTGCTTGACACAGAAGGAGAGAAGAACAGCTCTACTTAAAATATAATGTATTGTAAAACACAGAGCATTCTGCGTTTTTAGAAATTATGTTTAAGGCTTCTTGTATTTGACTCTGTTACTGGGAAGTAAGGGATATTACTTTGTAAAGCCATCTGTACTCGTATGTATCTTATCTGAGGGGTGACTGTTGGTCTGGCTCATGCCAGGAAAGCAGAACAGTTTATTTGGCTATGCTTTCAAAGAGCACACATTATAATCCATTTATTATTGTATTTTTCACATGTCATATTCATATATCCATACTATGGTATTCATTTACTCATCCTTTGATTCATTTATTTGTATTCTTTATTACTCGTGATATATTGTTTGTAATCTATTTTAGATATTCATTTGACTTATTTTTTACCTTACAGTTATATTGAGATCTTACATCTATATTGATTTTGTGCTGATTATCTTGTATACACGTTTTGCTGTTGCTGTGTTCCAGCTTAATTTCTTTTGGTATGAGGAAGGGTTCTCTAATAGAGATCAGCTGATGAAGAATTGCTGTCATGGGCATGAAATATTTGTTTCATGAATGCTGTAAAGGAATTGTTTTGAGATTGTGAACAACTCTGGCTGCACTTCAAATGGTTGCTACATTTTCTTTTTCCCCCTTGGGAGCTCTCCTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000043_07452783_07459261.mRNA True 3446 mRNA 0.45 11 7452291 7459980

Neighbor

gene id symbol gene type direction distance location
CI01000043_07446177_07452227 NA coding upstream 64 7446113 ~ 7452227 (+)
CI01000043_07375020_07398849 RNF166.L, RNF166 coding upstream 53072 7375020 ~ 7399219 (+)
CI01000043_07301810_07355783 PIEZO1 coding upstream 96508 7301810 ~ 7355783 (+)
CI01000043_07259451_07296086 NA coding upstream 155084 7259058 ~ 7297207 (+)
CI01000043_07246033_07248353 APRT coding upstream 203168 7245758 ~ 7249123 (+)
CI01000043_07495007_07498279 NA coding downstream 32701 7492681 ~ 7498353 (+)
CI01000043_07506975_07515936 NA coding downstream 46871 7506851 ~ 7515957 (+)
CI01000043_07530040_07549512 NA coding downstream 69009 7528989 ~ 7549619 (+)
CI01000043_07551619_07563172 NA coding downstream 90382 7550362 ~ 7563458 (+)
CI01000043_07650041_07652969 NA coding downstream 189447 7649427 ~ 7653008 (+)
G193712 NA non-coding upstream 6482 7408632 ~ 7445809 (+)
CI01000043_07196847_07199775 PABPN1L non-coding upstream 250869 7196847 ~ 7201422 (+)
G193661 NA non-coding upstream 301561 7068547 ~ 7150730 (+)
G193600 NA non-coding upstream 433204 7018544 ~ 7019087 (+)
G193582 NA non-coding upstream 470168 6981657 ~ 6982123 (+)
G193641 NA non-coding downstream 3567 7463547 ~ 7469047 (+)
G193662 NA non-coding downstream 10210 7470190 ~ 7471580 (+)
G193636 NA non-coding downstream 31957 7491937 ~ 7597959 (+)
G193773 NA non-coding downstream 234502 7694482 ~ 7720234 (+)
G193584 NA other upstream 517444 6931976 ~ 6934847 (+)
G193422 NA other upstream 803949 6644141 ~ 6648342 (+)
G193344 NA other upstream 1141753 6310152 ~ 6310538 (+)
G193125 NA other upstream 1241398 6205688 ~ 6210893 (+)
G192489 NA other upstream 1899667 5467317 ~ 5552624 (+)
G193650 NA other downstream 55544 7544525 ~ 7544607 (+)
CI01000043_07667056_07673079 NA other downstream 208575 7665689 ~ 7673725 (+)

Expression


Co-expression Network