CI01000043_07495007_07498279


Basic Information

Item Value
gene id CI01000043_07495007_07498279
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 7492681 ~ 7498353 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000043_07495007_07498279.mRNA
ATATAAAAATACGAATTATATACTCTATAGAGTGTGGCATTTTAAATGGCAGCGTTTTCCAAAAAAAGTGTTTTTTTTTTGTTTTTTTTTTTTCAATTGTTTTACAATTGAAAATTAAGTGCAGAGAGGGTGATGTGCTTGTAGTTTTTCACACTAGGTCTGTAAATTGTTTATTTTTTAAATCCACAGAGACAAAAGTACCCATATGTGAAAAGAAACATCTTTTATCTAATTTTAGACAGTTTTTTTTTAGATTGCTAACCATACATTGGTATAAAGTGAAATCACGCTGTTATTTTATTATTTTTTTATATATATATATATATAATTGCTAGGACAAATTTCTCAATATTTAGTTCACTTTTTAAAAAAACAAAAACAAAAAAACTTCTTCACTCCTTACCAACTTTCACTTTGGCACAGCAGTTAATTTCACATTCAAAATACACCAAAATATCGTAGGGTTACATATGTGTAAGATTATTTTAATCTCTATTTATTTTTCCTGTGCCTCATTCTCAGTTTGTCTTTTTCACTCATTGAACGACATAGGCCTATGGGAAAAGAGTCATGAACATGAAGCCAATTCGTTCACAAAACCTCCAACTTTTACTTCTGTACTTGGCTTTTATACATGTTTCAGGGGTGGTGTAGCAACTGTCCAATGAGAATACACATTACATCATTATAGAATGTGAGACAGAATAATAAGTCTGTATATGGTCAGTTTCCGGCTTTCAGGGCCCTTTCTCCTAGATATAGAAACAGGGCCCCTTGGCTGCTTTCCATGAAACAAACAGATGTGTGATGAAACAAGAACATCTCTTCTCCCCTCTAACACTTAAAACCTTACAGACCAGAGAGAGAGAACACAGGGAGACACAGAGAAAGAAAAGTCAACATCTTTCAGTATGTAACCTGGTTCCCTGAGAAGGCAAAGAGACGCTGCATCATGGTGTTGATGCTATGGGAACGCCTTCAGTGTGCACCAGTGTCTGAAGTACATGTTAAATCACACCAATCTTATTGGCCATGTCGGTCATATGACGTCACTGATTCGCCGGCATGACTAACCTTAAGACATCCCATTTGAGGGAACTCAACGCTGCATCATGGTGCTGATCCATCTGCTCAACAACTGCCTGTAACCCTCGGTCCTCTTCGGAAGAGAATGGCAAAAGTACTTTCAGAAGATCTAGCCAAGAATAACTTGCTGTGTCCGTTCATGTTTTGAAGGAGGCGTGGCTTTGAAGGGAGGGTGGGATCTCATGCTTTCAAAGCTAGCTTGCTGTTGCTACCCTCTCTGAAATTGCCTACCCTACCTTTAATATGTTTCAAATTAGGCTTTTGTATGTGGATTTGCGGAGGAGTCTTCATGTACTCCTGGCTTTGAGTCGGAGTTGCTGGTGTTTAAAGTGCACAGAGATCACCTTCACCAAGGAAAAAGACTAGGAAGAGGTAGGCTGTGTTCTCTTTAAATAAAACCTTGAAGAAACTGAACGTTTATTTAAATTTTTTTTTTTTTAGTATTTGGCTAAATAATCCCTTGCACAACGCAATCAGATACTAACTGTGAACTATAACATTCAATCAAATTTTAGGCATATACGTTCCCTGTATCCACTAAATTTGATTTTATCAGGGTCTCGCACAAGTGTGTTGTAGCTCACAAATAAGTATTGATGATGTATGCCATAAATAAGTGTTTTCACTTGATGCTGCGTCAGTAGATGATGCTATGAGGACACCCTCCAGAGTCATCCATGCATCAAAAGGACACACCATCGCACCACAGATTTTTTTTAGTCAGGAAGTGAATTATCTGCCTGTGTTTTGTCAGAATTTCCAGCAAACAAAAGCGAGAGTTATCTTTGCCCAGGTTGGAACACTACACTTTTTCATGGGTGTGTGTGTCTCTGTATCCGAGCACAGATCACTAACTCCACCACCTTTGACTTTATCACCATCTCTGGCATGATGGAGCAGGGCAAAAGTTATATACAGAAAATGAGCAAAGAGCGCTCCCATTATAAACAATGTAGCTGATATCACAGATTGACCAGATATACGGTACTACAGAAATGCTGGCATCATTATGTTTTTAAAATTAAGTATCTACTTGGTAACCCTGATTAATCACAAAGATGAAGTACTGGTACTTTTGACAACAGACCATCATCAGGGTGTTTCCACAGCATCAGCTACTGACACAGCGTCTTGTTTCCCACTCAGGGAACCAGGTTTACATATGTGACGAGATGCTTTATTTGCCAGTTGAATCTCTTTTCTCACAGTAATTTTTAATACATGTGATGGAAGAACAAGAATGCTCTTTCAGTCCTCTGACAAGTGGTTTGATGTGGACACGGATGGGACTGTAACGCTGAAGAGACAAGTGACTCTTCATGAAGGTCACAAGGTGTTTTCTGTGCACGCTTGGGACTCCAGTGGCAAGAAGCACACGGTGTCTGTCAGAGTTGAGCGTGTCCACCATCATGAGGACCATCACATGGACACGGTCATGAACATCTCCTCTCCACAGATGGAGTCTCACTCTGATGATCTGATTCTGATGTTTCCAAAGTCTTCGACGGGTCTAAAGAGAGCAAAGAGAGGTTGGGTTATTCCTCCGTTCCGTGTTCTTGAGAATAGCAGAGGTCCTTTCCCAATGAAGCTGGTCCAGATAAAGTCAGACATGTCTAGTGAAGCTCAGATGCAATACAAGATCACAGGTGAAGGAGCAGATCTGGACCCTAAGGGGACTTTCACTATAGAAAGATTATCAGGGAATCTGTTTGTGACTCGACCACTCGACAGAGAAAGAAAAGCTTCATACAGACTTATAGCTCATGCTACTGGAGTTGATGTGGATGTAGCAGAAAAGCCAATGGAAATTATCGTAAATGTGCTGGACCAAAATGATGATTATCCTGTTTTTACTCAAAATCCATTTAATGGAAATGTTTCTGAAGCTGCTGAAATAGGTCATGAGTTTATGACAGTCACAGCCACTGATGCAGATGATCCAGATACTGACAATGCTGTGATCAGATACTCAATTGTCAAGCAAGATCCAGAATTGCCAAATCCAAACATGTTTGAAATCAACTCTGTTACTGGAGGAATTCGTGTGAATTCTTTAGGCTTGGACAAAGAGAAATGGTCCAAATACACTTTGACAGTTGTCGCTGCTGATATGGAAGGAAGAGGTTTTTCAACCAGTGGCACAGCTGTTATTACTGTGACTGACAGCAATGATAATGCAAAATCACAGAAGATAACGTATAAAATTGGCAGTGATCCTGCCGGCTGGCTGAGTGTACATCAAGACACTGTAACGATTAAAGTCAAGACGCTTACGGATAGAGAATCTCCCCATGTGAAAGATGGCAAATACACAGCTATCATTTTGTCCGTGGATGATGGAAATCCTCCAGCTACTGGCACTGGAACCCTGGTAATTGATTTGGAGGATTTGGGCATACATTCTGGCTGCAATGATTCAGCCTGTTCCACACTTCTGCTGTGAAGAAGTAAACATGGTTAAATGTGTAAACAGGGCCTTATATACACCTTTAGAGTTCATTAATTGTTTATTCATAA

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000043_07495007_07498279.mRNA False 3603 mRNA 0.40 8 7492681 7498353

Neighbor

gene id symbol gene type direction distance location
CI01000043_07452783_07459261 NA coding upstream 32701 7452291 ~ 7459980 (+)
CI01000043_07446177_07452227 NA coding upstream 40454 7446113 ~ 7452227 (+)
CI01000043_07375020_07398849 RNF166.L, RNF166 coding upstream 93462 7375020 ~ 7399219 (+)
CI01000043_07301810_07355783 PIEZO1 coding upstream 136898 7301810 ~ 7355783 (+)
CI01000043_07259451_07296086 NA coding upstream 195474 7259058 ~ 7297207 (+)
CI01000043_07506975_07515936 NA coding downstream 8498 7506851 ~ 7515957 (+)
CI01000043_07530040_07549512 NA coding downstream 30636 7528989 ~ 7549619 (+)
CI01000043_07551619_07563172 NA coding downstream 52009 7550362 ~ 7563458 (+)
CI01000043_07650041_07652969 NA coding downstream 151074 7649427 ~ 7653008 (+)
CI01000043_07667056_07673079 NA coding downstream 167336 7665689 ~ 7673725 (+)
G193662 NA non-coding upstream 21101 7470190 ~ 7471580 (+)
G193641 NA non-coding upstream 23634 7463547 ~ 7469047 (+)
G193712 NA non-coding upstream 46872 7408632 ~ 7445809 (+)
CI01000043_07196847_07199775 PABPN1L non-coding upstream 291259 7196847 ~ 7201422 (+)
G193661 NA non-coding upstream 341951 7068547 ~ 7150730 (+)
G193773 NA non-coding downstream 196129 7694482 ~ 7720234 (+)
G193584 NA other upstream 557834 6931976 ~ 6934847 (+)
G193422 NA other upstream 844339 6644141 ~ 6648342 (+)
G193344 NA other upstream 1182143 6310152 ~ 6310538 (+)
G193125 NA other upstream 1281788 6205688 ~ 6210893 (+)
G192489 NA other upstream 1940057 5467317 ~ 5552624 (+)
G193650 NA other downstream 17171 7544525 ~ 7544607 (+)

Expression


Co-expression Network