CI01000043_07530040_07549512


Basic Information

Item Value
gene id CI01000043_07530040_07549512
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 7528989 ~ 7549619 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000043_07530040_07549512.mRNA
TTATAAAATCAGCCTAAGAGCAAATGTTTAAGCAATGACAGCACACTAAACCTGTTTACCATATTTTGCTCTATAATTTCTTTGATTAAGCAAACTCATGAATAACATCATTTGAAAAATGATATCAAGGTTCTGATATTACAGTTTTGGTAACACTTTAGAATAACTCACACTATGAAGCATTAGTTAAGCATTAGTAAATAGTTAGTTCATCATTTATAAAGCATTAATAGACATTAGTAAGCAGTTTATAAATATACCTATAAATGCTTTGTTCTTGATTTATAAACTTATCTATAATGTGTTTAATAAATGTATTTTCATACTTTATTAATGATCAATTTATCATTTTTAAATTAAGTATTACATTATTTACAAACCAGTTCTTTAGTTGTCATTAGTGGTTCATAAGATCATTTAGGAAATGTAAGTAAATGATTAATAAACTATTTAAACATTCATTTATACATCTTATTATTTAGACATATAGTAATAGTTACTCAGTGTGTTAATAAATGCTTTATTAATACATATTCCTACTGTAATTTATGATTAATTCGGGTAGTTATAAAACATTTAGAAGTGGTCAGTTAACTGTTACCCAGTTTTTTTTTTTTTTTTTCAATCGCTAGGACACATTTCTCAATACATCACATTTTTTAAAAAAAAAACTCTTCACATTGTTCTTCTTACAAATTTTTAGCTTGGTACAGCAGTAAATTTCACATCCAAAATGCACTAAAACTACCAAAACAATTTATACATGTCTCAAATAACTCATTCTTTCATAACACAAGCATTCATTATTCAGCGTGTTTAGATTTGTATTATGCTAAATTTTAAACTAAAGTCTAACAGTTTTGAAATGTATGTTTTGCTGGTGGTTGTGTCTGAGTAAGAAAAGAATTTATGTAATTTGAAAGATGTTGTCACTGAATACATATCTCATATTTTAAGTGTGTTACATAAAAAGATTTAATATGCTTCAAATTAGGTCCTTTTGTATGGATTTGCTGAGGGGTCTTCATGTACACCTGGCTTTGAGTCGGAGATGCTGGTTTTTAAAGTGCCCAGAGATCACTTTCACCAAGGAAGAAGACTAGGAAGAGTAATTTTTAATACATGCGATGGAAGAACAAGAACGCTCTTTCAGTCCTCTGACAAGCGGTTTGATGTGGACACGGATGGGACTGTAACTCTCAAGAGTCAAGTGGCTCTTCATGAAAGTCACAAGGTGTTTTCTGTGCACGCTTGGGACTCTAAATGCGAGGAGCACACGGTGTCTGTCAGAGTTGAGCGTGTCCACCAAAATGAGGACCATCACAAGGACACGGTCATGAACATCTCTCCACAGGCTATGTTAAGCTTGGCCGTGGCATGGGCCAGTACATCCAATAATTTCCTGTATGTGGGGCTGACAGAAGGAGAGGGCTCAATTGATTCTCTCTTCGCCCTCTCCAACTACATCAAGCTCCTCAGAGCTAGACACTGCCAGCAACATGCTCTCCCGGGATTGGAAGATGCCAAAGAATGGGCTTACAGATACAGCAGATTGCCCGAGCCATTACAGGAGGATTGAGAAAGCAAAAACCCTTTCTTAAATTCCTCATGATCGGATCCACCATGGTTCATCTACAGCTGTCTGACCCTACCTGAGGGGTGAAGACACTTGCCCCTCCTCTCTCA

Function

NR:

description
Si:busm1-71b9.3 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000043_07530040_07549512.mRNA False 1686 mRNA 0.35 3 7528989 7549619

Neighbor

gene id symbol gene type direction distance location
CI01000043_07506975_07515936 NA coding upstream 13032 7506851 ~ 7515957 (+)
CI01000043_07495007_07498279 NA coding upstream 30636 7492681 ~ 7498353 (+)
CI01000043_07452783_07459261 NA coding upstream 69009 7452291 ~ 7459980 (+)
CI01000043_07446177_07452227 NA coding upstream 76762 7446113 ~ 7452227 (+)
CI01000043_07375020_07398849 RNF166.L, RNF166 coding upstream 129770 7375020 ~ 7399219 (+)
CI01000043_07551619_07563172 NA coding downstream 743 7550362 ~ 7563458 (+)
CI01000043_07650041_07652969 NA coding downstream 99808 7649427 ~ 7653008 (+)
CI01000043_07667056_07673079 NA coding downstream 116070 7665689 ~ 7673725 (+)
CI01000043_07730390_07733887 NA coding downstream 180771 7730390 ~ 7735835 (+)
G193662 NA non-coding upstream 57409 7470190 ~ 7471580 (+)
G193641 NA non-coding upstream 59942 7463547 ~ 7469047 (+)
G193712 NA non-coding upstream 83180 7408632 ~ 7445809 (+)
CI01000043_07196847_07199775 PABPN1L non-coding upstream 327567 7196847 ~ 7201422 (+)
G193661 NA non-coding upstream 378259 7068547 ~ 7150730 (+)
G193773 NA non-coding downstream 144863 7694482 ~ 7720234 (+)
G193584 NA other upstream 594142 6931976 ~ 6934847 (+)
G193422 NA other upstream 880647 6644141 ~ 6648342 (+)
G193344 NA other upstream 1218451 6310152 ~ 6310538 (+)
G193125 NA other upstream 1318096 6205688 ~ 6210893 (+)
G192489 NA other upstream 1976365 5467317 ~ 5552624 (+)

Expression


Co-expression Network