CI01000043_07650041_07652969


Basic Information

Item Value
gene id CI01000043_07650041_07652969
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 7649427 ~ 7653008 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU219852
CCTGAAGCTGCTGAAATAGGTCATGAGTTTATGACAGTCACAGCCACTGATGCAGATGATCCAAATACTGACAATGGTGTGATCAGTTACTCAATTGTCAAGCAAGATCCAGAATTGCCAAAACCAAACATGTTTGAAATCAACTCTGTTACTGGAGGAATTCGTGTGAATTCTGTAGGCTTGGACAAAGAGAAATGGTCCAAATACACTTTGACAGTTGTGGCTACTGACATGGAAGGAAGAGGTTATTCAACCACTGGCACAGCTGTTATTACTGTGACTGACAGCAATGATAACGCACCTCAGTTTGAGCAAACCTCGCACACTGTATCTGTCCCAGAGAATAAAGTAGGGGCTGTAGTGGCCAAACTTACAGTTACTGATGAAGATGAAGAGGGATCTCCTGCCTGGTCAACCAAATATCGGATTATTAGCGGTGACAAGGGTGGGTTTTTCAATGTCAGTACTGGACCCAGCCGGCTAGAGGGCATCATCACCACTGCAAAGCCTCTGGACTTTGAGAAGAACAAGCAATACATTCTGTCTGTGATTGTTGAGAACGATGAGCCGTTCGTCGGTGCTTTGGCCACTTCCACTGCCACAGTCACGGTGAATGTAGAAGATGTGAATGAGCCTCCAGAGTTTAATCCAAAGGAGAAGATTATTTACAAACCTGAA
>CI01000043_07650041_07652969.mRNA
CTTTAAATGTTGTTCAATTAAGTAAGCATTTCATTAAAAAGATCAAATGAAAATTTAGTGATAAAATGAAAAACAAAGAAACACATTACAGGTAACAGAACAAGTGGTGGGTCTATTGCACTTACACTGCAAGATAATGCACAAATCTATTATCAGATTTTTTTATCACAATGTCAAATATCGCAAATTTCAGATTCATTGCTGCATTTTAATACAGTTACAGTTCACTCCCAAAACTTTGCAGTGTTGTACTTAGCAGCATAAAAAATAAAACTTTTATTCAAATTATGAATGGGTTATGTACAGGAAGTGAGCAAAGTTACATATAGGAACTGAGCAAAGAGTGCTCCCTTTATAAACAATGAAGCTGACATCATCGCATTGGCTGGATTGATAAGAAAGGCTGGTGGTATCATTACTTTTTTTTAAATAAGTATCAGCTTGGTAACCCTAATTCCCTGATTAATCACGAAGTTGAAGTGCTGGTATTTTAGACAACACTATTTCAGAACATCATCACACCTGGAGGGTGTTCCCATAGCATCAGCTACTGACAAAGCGTCTTGTTCTCCACTCAGGGAACCAGGTTTACATTTATGACAGGATGATTTATTATGCAAATTGAATCCCTTTTTCTCACAGTAATTTTTAATACATGCGATGGAAGAACAAGAACGCTCTTTCGGTCCTCTGAGGAGTGGTTTGATGTGGACACGGATGGGACTGTAACACTGAAGAGACAAGTCACTCTTCATGAAGGTCACAAGGTGTTTTCTGTGCACGCTTGGGACTCCAGTGGCAAGAAGCACACGGTGTCTGTCAGAGTTGAGCGTGTCCACCATCATGAGGACCATCACATGGACACGGTCATGAACATCTCCTCTCCACAGATGGAATCTCCCTCTGATGATCTGGTTCTGATGTTTCCAAAGTCTTCAACGGGTCTAAAGAGAGCAAAGAGAGAAGCAAAGGGAGGTTGGGTTATTCCTCCATTCAATGTTCTTGAGAATAGCAGAGGTCCTTTCCCAATAAAGCTGGTCCAGATAAAGTCGGACTATTCTACTGGAGTTCAGATGCTATACAGGATCACAGGTGAAGGAGCAGATCTGGACCCTAAGGGGACTTTCACTATAGAAAGATTATCAGGGAATCTGTTTGTGACTCAGCCACTCGACAGAGAAAAAAAAGCTTCATACAGAATTATAGTTCATTATACTGGAGTTGATGTGAATGTAGCAGAAAAGCCAATGGAAATTATTGTAAATGTGCTGGACCATAATGATAATAAGCCTGTTTTTACTCAAAATCCATTCAATGGAAATGTTCCTGAAGCTGCTGAAATAGGTCATGAGTTTATGACAGTCACAGCCACTGATGCAGATGATCCAGATACTGACAATGCTGTGATCAGTTACTCAATTGTCAAGCAAGATCCAGAATTGCCAAAACCAAACATGTTTGAAATCAACTCTGTTACTGGAGGAATTCGTGTGAATTCTGTAGGCTTGGACAAAGAGAAATGGTCCAAATACACTTTGACAGTTGTCGCTACTGACCTGAATGGACATGGTTTTTCAACCACTGGCACAGCTGTTATTACTGTGACTGACAGCAATGATAACGCACCTCAGTTTGAGCAAACCTCGCACACTGTATCTGTCCCAGAGAATGAAGTAGGGGCTGTAGTGGCCAAACTTACAGTTACTGATGAAGATGAAGAGGGATCTCCTGCCTGGTCAACCAAATATCGGATTATTAGCGGTGACAAGGGTGGGTTTTTCAATGTCAGTACTGGACCCAGCCGGCTAGAGGGCATCATCACCACTGCAAAGCCTCTGGACTTTGAGAAGAACAAGCAATACATTCTGTCTGTGATTGTTGAGAACGATGAGCCGTTCGTCGGTGCTTTGGCCACTTCCACTGCCACAGTCACGGTGAATGTAGAAGATGTGAATGAGCCTCCAGAGTTTAATCCAAAGGAGAAGATTATTTACAAACCTGAAGATTTACTGGTTGATAGTGAATTGGTTTCTTATACAGCCACTGATCCAGACATTGGATTGGAGGATACATTCTGTCTGCAATGATTCATTTATCAACCCTTTGCCCCCTTCTGCTGTGAAGAA

Function

NR:

description
Si:busm1-71b9.3 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU219852 True 171 TUCP 0.45 1 7652715 7652885
CI01000043_07650041_07652969.mRNA False 2126 mRNA 0.41 8 7649427 7653008

Neighbor

gene id symbol gene type direction distance location
CI01000043_07551619_07563172 NA coding upstream 85969 7550362 ~ 7563458 (+)
CI01000043_07530040_07549512 NA coding upstream 99808 7528989 ~ 7549619 (+)
CI01000043_07506975_07515936 NA coding upstream 133470 7506851 ~ 7515957 (+)
CI01000043_07495007_07498279 NA coding upstream 151074 7492681 ~ 7498353 (+)
CI01000043_07452783_07459261 NA coding upstream 189447 7452291 ~ 7459980 (+)
CI01000043_07667056_07673079 NA coding downstream 12681 7665689 ~ 7673725 (+)
CI01000043_07730390_07733887 NA coding downstream 77382 7730390 ~ 7735835 (+)
G193636 NA non-coding upstream 117532 7491937 ~ 7597959 (+)
G193662 NA non-coding upstream 177847 7470190 ~ 7471580 (+)
G193641 NA non-coding upstream 180380 7463547 ~ 7469047 (+)
G193712 NA non-coding upstream 203618 7408632 ~ 7445809 (+)
CI01000043_07196847_07199775 PABPN1L non-coding upstream 448005 7196847 ~ 7201422 (+)
G193773 NA non-coding downstream 41474 7694482 ~ 7720234 (+)
G193650 NA other upstream 87627 7544525 ~ 7544607 (+)
G193584 NA other upstream 714580 6931976 ~ 6934847 (+)
G193422 NA other upstream 1001085 6644141 ~ 6648342 (+)
G193344 NA other upstream 1338889 6310152 ~ 6310538 (+)
G193125 NA other upstream 1438534 6205688 ~ 6210893 (+)

Expression


Co-expression Network