G189334


Basic Information

Item Value
gene id G189334
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 351079 ~ 351447 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU215050
CTCTAAAGACCCCTCTGTCAAGCTCCTGAAGTTTGCGGACGACACCACGGTCATCTGCCTCATCCGGGACGGAGACAAGTCTGCTTACAGACAGGAGGTTAGAGAGCTGGCTGTCTGGTGCAGTCACAATAACCTGGAGCTGAACACGCTCAAAACAGTGGAGATGATCGTGGACTTCAGAAGAAACCCCCCTGCTCTCCCCCCACTCACCATCATGAACAGCACTGTAAAAACAGTGGAGTCATTCAGGTTCCTCGGCAACACCATATCTCAGGACCTGAAGTGGGACATTCACATAGACTCCATTGTGAAAAAGGCCCAACAGAGGCTGTACTTCCTCCACCAACTGAGGAAGTTCAACCTACCACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU215050 True 369 lncRNA 0.51 1 351079 351447

Neighbor

gene id symbol gene type direction distance location
CI01000043_00176126_00193756 NA coding upstream 156893 176076 ~ 194186 (+)
CI01000043_00174845_00175959 NA coding upstream 175014 172295 ~ 176065 (+)
CI01000043_00093397_00132783 SIPA1 coding upstream 217606 92844 ~ 133473 (+)
CI01000043_00040385_00051009 RASGRP2 coding upstream 300070 40327 ~ 51009 (+)
CI01000043_00372873_00405272 CACNB2, CACNB2A, CACB2 coding downstream 21426 372873 ~ 405425 (+)
CI01000043_00449493_00494730 MYOM1B, MYOM1 coding downstream 98046 449493 ~ 494730 (+)
CI01000043_00529899_00530472 NA coding downstream 178401 529848 ~ 530885 (+)
CI01000043_00613106_00620046 METTL4 coding downstream 261659 613106 ~ 620487 (+)
CI01000043_00670862_00685333 ACER2 coding downstream 318046 669493 ~ 686239 (+)
G189296 NA non-coding upstream 3672 300804 ~ 347407 (+)
G189245 NA non-coding upstream 115467 234129 ~ 235612 (+)
G189262 NA non-coding upstream 121839 228820 ~ 229240 (+)
G189240 NA non-coding upstream 135370 210439 ~ 215709 (+)
G189236 NA non-coding upstream 142084 206979 ~ 208995 (+)
G189340 NA non-coding downstream 62426 413873 ~ 414700 (+)
G189281 NA non-coding downstream 75783 427230 ~ 430719 (+)
G189288 NA non-coding downstream 86056 437503 ~ 438239 (+)
G189289 NA non-coding downstream 174273 525720 ~ 527581 (+)
G189383 NA non-coding downstream 212207 563654 ~ 565387 (+)
G190241 NA other downstream 1332109 1683556 ~ 1692479 (+)
G190272 NA other downstream 2090415 2441862 ~ 2443710 (+)
G191670 NA other downstream 3551786 3903233 ~ 3909966 (+)
G191644 NA other downstream 3956501 4307948 ~ 4350614 (+)
G192454 NA other downstream 4641566 4993013 ~ 4993356 (+)

Expression


Co-expression Network