G189383


Basic Information

Item Value
gene id G189383
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 563654 ~ 565387 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU215101
CAATGGCCTATAGTCACAGTGGATATATATCAAAATGCTCCTCTCTAAGTTCATTTTTGTAGCAGACTAACAAGTTTTTGGACATTGAACGGCTTTTCTGAGGTAAATTTTACGGTAAATGTGACATGGTCTCACTCCAGTCTATGGGAAAGTAGCCCATTTTCGTTTTATTGTGCCTGAAAACTCACCCTGACACCCCCCACCCCCGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU215101 True 210 lncRNA 0.42 2 563654 565387

Neighbor

gene id symbol gene type direction distance location
CI01000043_00529899_00530472 NA coding upstream 32769 529848 ~ 530885 (+)
CI01000043_00449493_00494730 MYOM1B, MYOM1 coding upstream 68924 449493 ~ 494730 (+)
CI01000043_00372873_00405272 CACNB2, CACNB2A, CACB2 coding upstream 158229 372873 ~ 405425 (+)
CI01000043_00176126_00193756 NA coding upstream 369468 176076 ~ 194186 (+)
CI01000043_00174845_00175959 NA coding upstream 387589 172295 ~ 176065 (+)
CI01000043_00613106_00620046 METTL4 coding downstream 47719 613106 ~ 620487 (+)
CI01000043_00670862_00685333 ACER2 coding downstream 104106 669493 ~ 686239 (+)
CI01000043_00700044_00705027 NA coding downstream 133750 699137 ~ 705201 (+)
CI01000043_00713100_00730032 ACO1 coding downstream 147713 713100 ~ 732043 (+)
CI01000043_00732508_00746912 SEPSECS coding downstream 167121 732508 ~ 748167 (+)
G189289 NA non-coding upstream 36073 525720 ~ 527581 (+)
G189288 NA non-coding upstream 125415 437503 ~ 438239 (+)
G189281 NA non-coding upstream 132935 427230 ~ 430719 (+)
G189340 NA non-coding upstream 148954 413873 ~ 414700 (+)
G189334 NA non-coding upstream 212207 351079 ~ 351447 (+)
G189377 NA non-coding downstream 19897 585284 ~ 587468 (+)
G189376 NA non-coding downstream 24701 590088 ~ 591256 (+)
G189374 NA non-coding downstream 37514 602901 ~ 603278 (+)
G189398 NA non-coding downstream 41001 606388 ~ 607180 (+)
G189404 NA non-coding downstream 58064 623451 ~ 624583 (+)
G190241 NA other downstream 1118169 1683556 ~ 1692479 (+)
G190272 NA other downstream 1876475 2441862 ~ 2443710 (+)
G191670 NA other downstream 3337846 3903233 ~ 3909966 (+)
G191644 NA other downstream 3742561 4307948 ~ 4350614 (+)
G192454 NA other downstream 4427626 4993013 ~ 4993356 (+)

Expression


Co-expression Network