G189377


Basic Information

Item Value
gene id G189377
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 585284 ~ 587468 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU215095
GTTTCTTTATGTGTGCTGTTACACTCAATTGTTTTGATTTCTCCACTAAATTCTCTCACAAAGAGACCGGCAGCGTGAGCCTCAACAGCATTACTAGAAATACACCATCCACTATCAGTCGCTGTTTGCGCTGAATGTAATCGTTCTTGCAGAATCATTCTTGCGTTTCGATGCTTCACTGGTTATTTTTTGACACTGAAGTTTTAATCAGGCTATTTTTCCGGTCAATCAAGTAAAATTCTCTTTCACTTGCCCCTTCAAAAAAATCCACCTGGCCTGGACAAGCGTTAATGTCGAGCCCTGCACTCTGCGTCTGTGATTCCACCGCCTTGATGATGCCTATGGCACACTACAGAGTTTAAATCATCTCTGTCACAAGGCACAGTTTGCCTCATAGACATTTCCAGGCACAGACTTCAACCACCACGAGAACTCATTGTTCTCGAGCCATTTTGAGGTAAACTTGCATTTACCCTTTTTAACCTAGGCTGGTCAGCTGAGCTAGCTGTAGTTCGACCTGTTTTCTGCTACCTCAGTTCTCTCTGATGACGCAGACACGCAGTAACTATCGCGGGGAAAAGAAAAAAAACTTCGGTGTGTCTAATGATTTTAAACAGACATGGGTCTGTCAGACTGGAGGAATTTTAGCGGTAATGTGACCAAAAATATTTAAGACCCATCAAATCTGAATTTAAGACATTTTAAGACTTTTTAAGGACCCGCGGCCCCCCTGTATTTATTAATATTTCTCCGATTGTGTTCATCAGAAAGAAGAAAGTCTTATACAGCTAGGATGGCTTGAGGATGAGTAAAGCTTGGGGTAATTTTCATTTGAAAGTGAACTAATCCTTTAAAGGAGTAAGTGAATATAATTCATTTTTGTTACAACTATGGAAGTTCCACCATTTTTGTATTTGTATTTACTGAGAACATATGCTTATGTTGAATATGATAACAATAATAAAGAACAATATTTCATGACTTCTAAAGCCACTTTTTTAAATGTCTAGTATTTAATGCTTTCATCTATCACAATAAATATAATGCCTTTGATTTGGGGGATTTTCTCAACAAATATGTGAGAACATATTGTGCCACAGTAATGCAAAAGCACATGTTAAGCATGTTCAAAGGAACCAGACATAACACACTGATCAAGCAGTTACATCTGTGTTTTTCTTTGCATACTTGGCCTCACACTAGCAGACACATACCTGCTTATCAAATCGCTCATGACATTCTTTTAACCAGTTAGTAAACTCCCTCTCAATCTTCACTCGTTGCTCCTGGCCATTGTGCACTCTGGTAAAAATGGTCTCTTTGTCACGGAGCTGAAGTTCCAGGTCCATAAAGGTAAGTTTGTTGGTGCTGACTTGGAACCGGTCATTGGCAAAGAGAACTCCTGAAATCCGGTTATAGCACTCAGACGGCACTGCACCTGGTTTCTTAGGCCTTTTACACCACTCAAACCTAACACACATACAAATTATCATTCATATTAAGTGAAAGTGAATGGATAATCTTTCATAACATTGTGTTATCTTTCTTTTTCTTTTTTTTTTTTAATGAGCATTTCGATATCATAGATATTTCTGTAAAGAATGTGTTCTTGTTTGCCTTCAGCACTATTTTTAAATAAAAAAATTATTGGTCTATATGTCCAAAGAATTTGCATATTAAGTTAAAAATAGTTAAACTTTTTAAAATGAGACTCCTGCTCTGTTCTGTTACATTCCACTCCATCTATTTGTTTTTGAACATAAGAACATTTCATCCACACCAAACCAGAAATGTGTTCTAGCATTATCTTTAATATGAATAAAGATACATTTCAGAGTCAATTTAAGTTCAATTGCCAGCTTTGTGACAATGTTGATTACCACAAAAAAACTTTTCAACTCATTCCAACTTTTCTTAAAAAAAAAAAAAAAAAAAAACGAGATTATAGTGAGGTAATTTCAATGGAAGTGACTGGAGCTGTTTCAATAGTATAGCCACAATGCATAAATAATACGCGTGTTAACATTAAGTGTGATAAAATCCTTTGGTAACCTTTTCTGTGTGAAGTTATATCCAGTTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU215095 True 2082 lncRNA 0.36 2 585284 587468

Neighbor

gene id symbol gene type direction distance location
CI01000043_00529899_00530472 NA coding upstream 54399 529848 ~ 530885 (+)
CI01000043_00449493_00494730 MYOM1B, MYOM1 coding upstream 90554 449493 ~ 494730 (+)
CI01000043_00372873_00405272 CACNB2, CACNB2A, CACB2 coding upstream 179859 372873 ~ 405425 (+)
CI01000043_00176126_00193756 NA coding upstream 391098 176076 ~ 194186 (+)
CI01000043_00174845_00175959 NA coding upstream 409219 172295 ~ 176065 (+)
CI01000043_00613106_00620046 METTL4 coding downstream 25638 613106 ~ 620487 (+)
CI01000043_00670862_00685333 ACER2 coding downstream 82025 669493 ~ 686239 (+)
CI01000043_00700044_00705027 NA coding downstream 111669 699137 ~ 705201 (+)
CI01000043_00713100_00730032 ACO1 coding downstream 125632 713100 ~ 732043 (+)
CI01000043_00732508_00746912 SEPSECS coding downstream 145040 732508 ~ 748167 (+)
G189383 NA non-coding upstream 19897 563654 ~ 565387 (+)
G189289 NA non-coding upstream 57703 525720 ~ 527581 (+)
G189288 NA non-coding upstream 147045 437503 ~ 438239 (+)
G189281 NA non-coding upstream 154565 427230 ~ 430719 (+)
G189340 NA non-coding upstream 170584 413873 ~ 414700 (+)
G189376 NA non-coding downstream 2620 590088 ~ 591256 (+)
G189374 NA non-coding downstream 15433 602901 ~ 603278 (+)
G189398 NA non-coding downstream 18920 606388 ~ 607180 (+)
G189404 NA non-coding downstream 35983 623451 ~ 624583 (+)
G189407 NA non-coding downstream 48076 635544 ~ 635752 (+)
G190241 NA other downstream 1096088 1683556 ~ 1692479 (+)
G190272 NA other downstream 1854394 2441862 ~ 2443710 (+)
G191670 NA other downstream 3315765 3903233 ~ 3909966 (+)
G191644 NA other downstream 3720480 4307948 ~ 4350614 (+)
G192454 NA other downstream 4405545 4993013 ~ 4993356 (+)

Expression


Co-expression Network