G189374


Basic Information

Item Value
gene id G189374
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 602901 ~ 603278 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU215092
GAGCCTGTAGAAAGCCTTTGTAATCGACGTTCGCGATGTCTAGCGTCCGCGCCAGCGCATCGCTGCTGTCCGGTCGGCAGTCATACACACAGACCGATTTCGTTGGCTTTTTTAACCGGTCTCTCTCCGCTCCGGCCTCGGTCATGTTCGTTTCGTCACACATTACTGCGTAGCCAGCGACATTTAAAGATTTCGCGCCAGGAACATCACCCAAAAGTCCCTTCTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU215092 True 227 lncRNA 0.54 2 602901 603278

Neighbor

gene id symbol gene type direction distance location
CI01000043_00529899_00530472 NA coding upstream 72016 529848 ~ 530885 (+)
CI01000043_00449493_00494730 MYOM1B, MYOM1 coding upstream 108171 449493 ~ 494730 (+)
CI01000043_00372873_00405272 CACNB2, CACNB2A, CACB2 coding upstream 197476 372873 ~ 405425 (+)
CI01000043_00176126_00193756 NA coding upstream 408715 176076 ~ 194186 (+)
CI01000043_00174845_00175959 NA coding upstream 426836 172295 ~ 176065 (+)
CI01000043_00613106_00620046 METTL4 coding downstream 9828 613106 ~ 620487 (+)
CI01000043_00670862_00685333 ACER2 coding downstream 66215 669493 ~ 686239 (+)
CI01000043_00700044_00705027 NA coding downstream 95859 699137 ~ 705201 (+)
CI01000043_00713100_00730032 ACO1 coding downstream 109822 713100 ~ 732043 (+)
CI01000043_00732508_00746912 SEPSECS coding downstream 129230 732508 ~ 748167 (+)
G189384 NA non-coding upstream 7621 563845 ~ 595280 (+)
G189376 NA non-coding upstream 11645 590088 ~ 591256 (+)
G189377 NA non-coding upstream 15433 585284 ~ 587468 (+)
G189383 NA non-coding upstream 37514 563654 ~ 565387 (+)
G189289 NA non-coding upstream 75320 525720 ~ 527581 (+)
G189398 NA non-coding downstream 3110 606388 ~ 607180 (+)
G189404 NA non-coding downstream 20173 623451 ~ 624583 (+)
G189407 NA non-coding downstream 32266 635544 ~ 635752 (+)
G189408 NA non-coding downstream 34512 637790 ~ 638252 (+)
G189410 NA non-coding downstream 36298 639576 ~ 639878 (+)
G190241 NA other downstream 1080278 1683556 ~ 1692479 (+)
G190272 NA other downstream 1838584 2441862 ~ 2443710 (+)
G191670 NA other downstream 3299955 3903233 ~ 3909966 (+)
G191644 NA other downstream 3704670 4307948 ~ 4350614 (+)
G192454 NA other downstream 4389735 4993013 ~ 4993356 (+)

Expression


Co-expression Network