G189407


Basic Information

Item Value
gene id G189407
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 635544 ~ 635752 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU215126
GGTGGGGCCTCCATGGATCGGACTTGTTTGTTCAGCACATCCCACAGATGCTCGATTGGATTGAGATCTGGGGAATTGGAATTGGAGGCACATGCACCCGGCCATCCACGTGATGTAAAAGAAAACGTGATTCAACAGACCAGGCCACCTTCCTCCATTGCTCCGTGGTCCAGTTCTGATGCTCACGTGCCCACTGTTGGCGCTTTCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU215126 True 209 lncRNA 0.54 1 635544 635752

Neighbor

gene id symbol gene type direction distance location
CI01000043_00613106_00620046 METTL4 coding upstream 15057 613106 ~ 620487 (+)
CI01000043_00529899_00530472 NA coding upstream 104659 529848 ~ 530885 (+)
CI01000043_00449493_00494730 MYOM1B, MYOM1 coding upstream 140814 449493 ~ 494730 (+)
CI01000043_00372873_00405272 CACNB2, CACNB2A, CACB2 coding upstream 230119 372873 ~ 405425 (+)
CI01000043_00176126_00193756 NA coding upstream 441358 176076 ~ 194186 (+)
CI01000043_00670862_00685333 ACER2 coding downstream 33741 669493 ~ 686239 (+)
CI01000043_00700044_00705027 NA coding downstream 63385 699137 ~ 705201 (+)
CI01000043_00713100_00730032 ACO1 coding downstream 77348 713100 ~ 732043 (+)
CI01000043_00732508_00746912 SEPSECS coding downstream 96756 732508 ~ 748167 (+)
CI01000043_00755986_00763327 LGI2A, LGI2 coding downstream 120089 755841 ~ 763946 (+)
G189404 NA non-coding upstream 10961 623451 ~ 624583 (+)
G189398 NA non-coding upstream 28364 606388 ~ 607180 (+)
G189374 NA non-coding upstream 32266 602901 ~ 603278 (+)
G189384 NA non-coding upstream 40264 563845 ~ 595280 (+)
G189408 NA non-coding downstream 2038 637790 ~ 638252 (+)
G189410 NA non-coding downstream 3824 639576 ~ 639878 (+)
G189425 NA non-coding downstream 22527 658279 ~ 664681 (+)
G189416 NA non-coding downstream 51251 687003 ~ 687381 (+)
G189413 NA non-coding downstream 51721 687473 ~ 689760 (+)
G190241 NA other downstream 1047804 1683556 ~ 1692479 (+)
G190272 NA other downstream 1806110 2441862 ~ 2443710 (+)
G191670 NA other downstream 3267481 3903233 ~ 3909966 (+)
G191644 NA other downstream 3672196 4307948 ~ 4350614 (+)
G192454 NA other downstream 4357261 4993013 ~ 4993356 (+)

Expression


Co-expression Network