G189410


Basic Information

Item Value
gene id G189410
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 639576 ~ 639878 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU215129
GCCAGGATTATGCCCAAGTTCAATTAGGACATTTAAGTACCTTTTATAAATGTGCCTTAGAAAAAAAACATTACATGATGTTTATTAACAAAGTTTGGGAGGAGCATGTTCAGATAATTAACCTAAGTAACACAAGTGGAGAGCATTCAGTTAATCAACTCAATTAACGACAAGAGGTATATATACAGCAGACTTACCTCTGTTCGTTTGACAGTTTATTAGCATCCCTCCACCACCCCATCTCCTCACTTCTATTTCTAACTATTCTTCCCACAAATGGGGGGGAGTACTCTGAGTTCAGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU215129 True 303 lncRNA 0.38 1 639576 639878

Neighbor

gene id symbol gene type direction distance location
CI01000043_00613106_00620046 METTL4 coding upstream 19089 613106 ~ 620487 (+)
CI01000043_00529899_00530472 NA coding upstream 108691 529848 ~ 530885 (+)
CI01000043_00449493_00494730 MYOM1B, MYOM1 coding upstream 144846 449493 ~ 494730 (+)
CI01000043_00372873_00405272 CACNB2, CACNB2A, CACB2 coding upstream 234151 372873 ~ 405425 (+)
CI01000043_00176126_00193756 NA coding upstream 445390 176076 ~ 194186 (+)
CI01000043_00670862_00685333 ACER2 coding downstream 29615 669493 ~ 686239 (+)
CI01000043_00700044_00705027 NA coding downstream 59259 699137 ~ 705201 (+)
CI01000043_00713100_00730032 ACO1 coding downstream 73222 713100 ~ 732043 (+)
CI01000043_00732508_00746912 SEPSECS coding downstream 92630 732508 ~ 748167 (+)
CI01000043_00755986_00763327 LGI2A, LGI2 coding downstream 115963 755841 ~ 763946 (+)
G189408 NA non-coding upstream 1324 637790 ~ 638252 (+)
G189407 NA non-coding upstream 3824 635544 ~ 635752 (+)
G189404 NA non-coding upstream 14993 623451 ~ 624583 (+)
G189398 NA non-coding upstream 32396 606388 ~ 607180 (+)
G189374 NA non-coding upstream 36298 602901 ~ 603278 (+)
G189425 NA non-coding downstream 18401 658279 ~ 664681 (+)
G189416 NA non-coding downstream 47125 687003 ~ 687381 (+)
G189413 NA non-coding downstream 47595 687473 ~ 689760 (+)
G189501 NA non-coding downstream 193062 832940 ~ 840609 (+)
G190241 NA other downstream 1043678 1683556 ~ 1692479 (+)
G190272 NA other downstream 1801984 2441862 ~ 2443710 (+)
G191670 NA other downstream 3263355 3903233 ~ 3909966 (+)
G191644 NA other downstream 3668070 4307948 ~ 4350614 (+)
G192454 NA other downstream 4353135 4993013 ~ 4993356 (+)

Expression


Co-expression Network