G189530


Basic Information

Item Value
gene id G189530
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 854487 ~ 854813 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU215282
GAAAATTATATTTCAGATTGAATGCATGTATGCTAGGTGAGAAACTTGACCACATGGGAGATTTGTGGTAAATTTCATCCCAAAATGCCCCCCGATAAAAATTACGTTCTGGGGGGTAAAACATTTTTTTTTTTTTTGGCAGGGTTCCCTGGGTAAAATGTGCATTCCAAGGGCTAAATATCATGTTATTTGGGCTCGCTTCAACCCGTGGACATGAAAAACAACCTGCGGCAACAGTGTAAAAGTAGCCCGCAGACTTGGCAACACTGTTTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU215282 True 274 lncRNA 0.42 2 854487 854813

Neighbor

gene id symbol gene type direction distance location
CI01000043_00825755_00838325 NA coding upstream 15896 825660 ~ 838591 (+)
CI01000043_00814611_00818100 NA coding upstream 34966 814552 ~ 819521 (+)
CI01000043_00776707_00791897 NA coding upstream 62556 776241 ~ 791931 (+)
CI01000043_00755986_00763327 LGI2A, LGI2 coding upstream 90541 755841 ~ 763946 (+)
CI01000043_00732508_00746912 SEPSECS coding upstream 106320 732508 ~ 748167 (+)
CI01000043_00872741_00876715 NA coding downstream 17928 872741 ~ 876985 (+)
CI01000043_00878804_00886856 NA coding downstream 23991 878804 ~ 886970 (+)
CI01000043_00898380_00913554 NA coding downstream 43567 898380 ~ 913647 (+)
CI01000043_00930835_00959810 BRAFLDRAFT_59675, DHX15 coding downstream 75516 930329 ~ 960211 (+)
CI01000043_01366462_01369312 NA coding downstream 511649 1366462 ~ 1379702 (+)
G189501 NA non-coding upstream 13878 832940 ~ 840609 (+)
G189413 NA non-coding upstream 164727 687473 ~ 689760 (+)
G189416 NA non-coding upstream 167106 687003 ~ 687381 (+)
G189425 NA non-coding upstream 189806 658279 ~ 664681 (+)
G189552 NA non-coding downstream 63597 918410 ~ 919428 (+)
G189554 NA non-coding downstream 66034 920847 ~ 921656 (+)
G189555 NA non-coding downstream 67503 922316 ~ 922516 (+)
G189461 NA non-coding downstream 123203 978016 ~ 978431 (+)
G189477 NA non-coding downstream 164801 1019614 ~ 1019913 (+)
G190241 NA other downstream 828743 1683556 ~ 1692479 (+)
G190272 NA other downstream 1587049 2441862 ~ 2443710 (+)
G191670 NA other downstream 3048420 3903233 ~ 3909966 (+)
G191644 NA other downstream 3453135 4307948 ~ 4350614 (+)
G192454 NA other downstream 4138200 4993013 ~ 4993356 (+)

Expression


Co-expression Network