G189487


Basic Information

Item Value
gene id G189487
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 1027241 ~ 1028134 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU215225
ACTTCCATTTCAGGCGAGTACAATGGTCGGAAGGAATCTCACCCATGCAGCCAAAATAATTCCATGCCGAGCTTGTGTGCGTCATCCCAAAATTATCCTCTGTGACGTCACAGCTCTGTGCCCTTGCGTGGGCGGATGCAACGATGGGACCCGTGCCAGAACGAGTGTGTGAGGCTCTGACGTCTTGTGCCAGCCTCCCTGAACGGGCGCAATGCCAAGCTAGCGCTTTCTTTTCAAATGAAAAGGCACGCTGCGAGAAGAGGTGGTATTCGGACAGATAAGTTACCGACAGATACCCAGTTGGTATCCGTGAGAGAAGTCATGAATAGATGGATTTGATTTACCACACATGGTCGTGAGATCACATCCCCGTTTTCACGGCTCAGTCAAGGGCAGGGTATACGTGACAGTGGCTCATCAGGCCCTTACTTTAGCTCGTTCCCCATCAGGACTCAGCAGGGGCTTAGATGTGCGTGTGTGTGTGTGTGCGTATTTTTGTGACATATCAGGACACAAATTTGTATAATGACATGGGTATGACATAGGTATTACAAGGAGAGGGTGACTTATGAGGACATTACTCCATGTCCCCATTTTTCAAAAGGCTTATAAATCATACAGAATGAGTTTTTGTGAGAAAGTAAAAATGTGCACAGTTTTCTGTGATGGGTAGGTTTAGGGGTAGGGGTAGTGTAGGGGGATAGAAAATACGATTTGTACAGTATAAAAACCATTACGCCTATGGAACGTCCCCACAATTCACAAAAACAAACCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTTGGGTTATGGATGTGCCCCCTAAGAATAGCGCTGATCACAGAGTAGCATCTCTTTTGCTCCCTGCCATTTTTAAATTATTGACTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU215225 True 894 lncRNA 0.46 1 1027241 1028134

Neighbor

gene id symbol gene type direction distance location
CI01000043_00930835_00959810 BRAFLDRAFT_59675, DHX15 coding upstream 67030 930329 ~ 960211 (+)
CI01000043_00898380_00913554 NA coding upstream 113594 898380 ~ 913647 (+)
CI01000043_00878804_00886856 NA coding upstream 140271 878804 ~ 886970 (+)
CI01000043_00872741_00876715 NA coding upstream 150256 872741 ~ 876985 (+)
CI01000043_00825755_00838325 NA coding upstream 188650 825660 ~ 838591 (+)
CI01000043_01366462_01369312 NA coding downstream 338328 1366462 ~ 1379702 (+)
CI01000043_01383746_01406582 PPARGC1A coding downstream 354045 1382179 ~ 1406593 (+)
CI01000043_01423076_01424727 NA coding downstream 394670 1422804 ~ 1424730 (+)
CI01000043_01626021_01650266 ADGRA3 coding downstream 597887 1626021 ~ 1651813 (+)
CI01000043_01704935_01732125 NA coding downstream 676699 1704833 ~ 1732221 (+)
G189477 NA non-coding upstream 7328 1019614 ~ 1019913 (+)
G189461 NA non-coding upstream 48810 978016 ~ 978431 (+)
G189555 NA non-coding upstream 104725 922316 ~ 922516 (+)
G189554 NA non-coding upstream 105585 920847 ~ 921656 (+)
G189552 NA non-coding upstream 107813 918410 ~ 919428 (+)
G189565 NA non-coding downstream 53979 1082113 ~ 1082292 (+)
G189445 NA non-coding downstream 386822 1414956 ~ 1415629 (+)
G190206 NA non-coding downstream 503578 1531712 ~ 1532051 (+)
G190216 NA non-coding downstream 529023 1557157 ~ 1557452 (+)
G190241 NA other downstream 655422 1683556 ~ 1692479 (+)
G190272 NA other downstream 1413728 2441862 ~ 2443710 (+)
G191670 NA other downstream 2875099 3903233 ~ 3909966 (+)
G191644 NA other downstream 3279814 4307948 ~ 4350614 (+)
G192454 NA other downstream 3964879 4993013 ~ 4993356 (+)

Expression


Co-expression Network