G190216


Basic Information

Item Value
gene id G190216
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 1557157 ~ 1557452 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU216062
ATTTGAAATGAGTGCAAAGCCACCAGATGACAAGCCTGCAACCATTAGCCAAAAAAGCGTAACGGCTAATGCTGCAGCTGCAGTAAAGACTGCCAGTACGCAGGAAAGGAGACCAGAGGCCATTACATGATAGGTTGAGAGGTGCTGCACGTGATTAAGTTAGCCGTTACGCTTTCTCCAATGGTAAGAGATACAGACCCTCTCATCTCCCTATAATAAAACAATTTCTGATGAGTGCGTGCCTTCACGGAGAAAAGCCGGATTCATATTTTCATTTATTAATAACTTAAATTCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU216062 True 296 lncRNA 0.43 1 1557157 1557452

Neighbor

gene id symbol gene type direction distance location
CI01000043_01423076_01424727 NA coding upstream 132427 1422804 ~ 1424730 (+)
CI01000043_01383746_01406582 PPARGC1A coding upstream 150564 1382179 ~ 1406593 (+)
CI01000043_01366462_01369312 NA coding upstream 187270 1366462 ~ 1379702 (+)
CI01000043_00930835_00959810 BRAFLDRAFT_59675, DHX15 coding upstream 596946 930329 ~ 960211 (+)
CI01000043_00898380_00913554 NA coding upstream 643510 898380 ~ 913647 (+)
CI01000043_01626021_01650266 ADGRA3 coding downstream 68569 1626021 ~ 1651813 (+)
CI01000043_01704935_01732125 NA coding downstream 147381 1704833 ~ 1732221 (+)
CI01000043_01842605_01846888 NA coding downstream 282631 1833978 ~ 1846921 (+)
CI01000043_01896926_01915626 KCNIP4 coding downstream 339474 1896926 ~ 1915626 (+)
CI01000043_01970557_01977108 NA coding downstream 413105 1970557 ~ 1977689 (+)
G190206 NA non-coding upstream 25106 1531712 ~ 1532051 (+)
G189445 NA non-coding upstream 141528 1414956 ~ 1415629 (+)
G189565 NA non-coding upstream 474865 1082113 ~ 1082292 (+)
G189487 NA non-coding upstream 529023 1027241 ~ 1028134 (+)
G190220 NA non-coding downstream 9193 1566645 ~ 1566951 (+)
G190221 NA non-coding downstream 17054 1574506 ~ 1574725 (+)
G190249 NA non-coding downstream 30094 1587546 ~ 1594020 (+)
G190290 NA non-coding downstream 75381 1632833 ~ 1633202 (+)
G190292 NA non-coding downstream 81404 1638856 ~ 1639321 (+)
G190241 NA other downstream 126104 1683556 ~ 1692479 (+)
G190272 NA other downstream 884410 2441862 ~ 2443710 (+)
G191670 NA other downstream 2345781 3903233 ~ 3909966 (+)
G191644 NA other downstream 2750496 4307948 ~ 4350614 (+)
G192454 NA other downstream 3435561 4993013 ~ 4993356 (+)

Expression


Co-expression Network