G190349


Basic Information

Item Value
gene id G190349
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 2191181 ~ 2195719 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU216224
CTCGTTCCTATACTACACTACGATGTCTTAATTTGACTACATAAAAGTGATTCACGAATCTGCAGTTCAATCCCTTATACAGCACTTTCACCCCATTTTTACTTTTCACAGAAACAAAATACTGCCCTATACACCGGCAATTTATATTTAAAGGATTAGTTCACTTCAGAATAAAAATTTCCTGATAATTTACTCACCCCCATGTCATCCAAGATGTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU216224 True 220 lncRNA 0.35 2 2191181 2195719

Neighbor

gene id symbol gene type direction distance location
CI01000043_02129173_02152417 NA coding upstream 38514 2129173 ~ 2152667 (+)
CI01000043_02033302_02075904 NA coding upstream 115033 2033302 ~ 2076148 (+)
CI01000043_01992845_02000632 NA coding upstream 189564 1992845 ~ 2001617 (+)
CI01000043_01970557_01977108 NA coding upstream 213492 1970557 ~ 1977689 (+)
CI01000043_01896926_01915626 KCNIP4 coding upstream 275555 1896926 ~ 1915626 (+)
CI01000043_02220697_02231568 SLC1A1 coding downstream 24978 2220697 ~ 2232712 (+)
CI01000043_02278110_02287253 ATXN1L coding downstream 80902 2276621 ~ 2288074 (+)
CI01000043_02335484_02351163 AP1G1 coding downstream 139765 2335484 ~ 2351384 (+)
CI01000043_02375390_02413694 PHLPP2 coding downstream 179671 2375390 ~ 2413793 (+)
CI01000043_02464522_02485377 USP10 coding downstream 268803 2464522 ~ 2486310 (+)
G190339 NA non-coding upstream 30024 2160932 ~ 2161157 (+)
G190338 NA non-coding upstream 64353 2126528 ~ 2126828 (+)
G190336 NA non-coding upstream 67296 2123661 ~ 2123885 (+)
G190306 NA non-coding upstream 237374 1953494 ~ 1953807 (+)
G190230 NA non-coding upstream 263263 1921032 ~ 1927918 (+)
G190364 NA non-coding downstream 23415 2219134 ~ 2219562 (+)
G190369 NA non-coding downstream 54542 2250261 ~ 2250488 (+)
G190280 NA non-coding downstream 70617 2266336 ~ 2267529 (+)
G190237 NA non-coding downstream 95401 2291120 ~ 2294501 (+)
G190233 NA non-coding downstream 158289 2354008 ~ 2355653 (+)
G190241 NA other upstream 498702 1683556 ~ 1692479 (+)
G190272 NA other downstream 246143 2441862 ~ 2443710 (+)
G191670 NA other downstream 1707514 3903233 ~ 3909966 (+)
G191644 NA other downstream 2112229 4307948 ~ 4350614 (+)
G192454 NA other downstream 2797294 4993013 ~ 4993356 (+)
CI01000043_05114193_05114497 BOLA3 other downstream 2918167 5114193 ~ 5114497 (+)

Expression


Co-expression Network