G190385


Basic Information

Item Value
gene id G190385
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 2358347 ~ 2358652 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU216263
ATTTCAGCATTTGTACTTTAAGTTACAGAAACACCTGGTTTCACAGACAAGGCTTAAAGGGTTAGTTCACCCAAAAATGAAAATAATGTCATTTATTACTTACCCTCATGCTGTTCCACACCCGAAAGACCTTCGTTAATTTCGGAACACAAATTAAGATATTTTTGTTGAAATCCAATGTCTCAGTGAGGCTTCCATAGCCAGCAATGACATTTCCTCTCTCAAGATCCATTAATGTACTAAAAACATATTTAAATCAGTTCATGTGAGTACAGTGGTTCAATATTAATATTGTAAAGCGACGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU216263 True 306 lncRNA 0.35 1 2358347 2358652

Neighbor

gene id symbol gene type direction distance location
CI01000043_02335484_02351163 AP1G1 coding upstream 6963 2335484 ~ 2351384 (+)
CI01000043_02278110_02287253 ATXN1L coding upstream 70273 2276621 ~ 2288074 (+)
CI01000043_02220697_02231568 SLC1A1 coding upstream 125635 2220697 ~ 2232712 (+)
CI01000043_02129173_02152417 NA coding upstream 205680 2129173 ~ 2152667 (+)
CI01000043_02033302_02075904 NA coding upstream 282199 2033302 ~ 2076148 (+)
CI01000043_02375390_02413694 PHLPP2 coding downstream 16738 2375390 ~ 2413793 (+)
CI01000043_02464522_02485377 USP10 coding downstream 105870 2464522 ~ 2486310 (+)
CI01000043_02504537_02519367 CRISPLD2, CRLD2 coding downstream 143271 2501923 ~ 2520632 (+)
CI01000043_02787002_02807892 NA coding downstream 428180 2786832 ~ 2808856 (+)
CI01000043_02834135_02840882 NA coding downstream 473397 2832049 ~ 2841013 (+)
G190233 NA non-coding upstream 2694 2354008 ~ 2355653 (+)
G190237 NA non-coding upstream 63846 2291120 ~ 2294501 (+)
G190280 NA non-coding upstream 90818 2266336 ~ 2267529 (+)
G190369 NA non-coding upstream 107859 2250261 ~ 2250488 (+)
G190235 NA non-coding upstream 112967 2195188 ~ 2245380 (+)
G190391 NA non-coding downstream 91289 2449941 ~ 2450276 (+)
G190401 NA non-coding downstream 142122 2500774 ~ 2501060 (+)
G190408 NA non-coding downstream 193471 2552123 ~ 2552368 (+)
G190884 NA non-coding downstream 254043 2612695 ~ 2613477 (+)
G190991 NA non-coding downstream 416956 2775608 ~ 2775815 (+)
G190241 NA other upstream 665868 1683556 ~ 1692479 (+)
G190272 NA other downstream 83210 2441862 ~ 2443710 (+)
G191670 NA other downstream 1544581 3903233 ~ 3909966 (+)
G191644 NA other downstream 1949296 4307948 ~ 4350614 (+)
G192454 NA other downstream 2634361 4993013 ~ 4993356 (+)
CI01000043_05114193_05114497 BOLA3 other downstream 2755234 5114193 ~ 5114497 (+)

Expression


Co-expression Network