Gene
RNA
| Item | Value |
|---|---|
| gene id | G190272 |
| gene name | NA |
| gene type | unknown |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000043 |
| NCBI id | null |
| chromosome length | 7746009 |
| location | 2441862 ~ 2443710 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU216143 | True | 1579 | TUCP | 0.39 | 2 | 2441862 | 2443710 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000043_02375390_02413694 | PHLPP2 | coding | upstream | 28069 | 2375390 ~ 2413793 (+) |
| CI01000043_02335484_02351163 | AP1G1 | coding | upstream | 90478 | 2335484 ~ 2351384 (+) |
| CI01000043_02278110_02287253 | ATXN1L | coding | upstream | 153788 | 2276621 ~ 2288074 (+) |
| CI01000043_02220697_02231568 | SLC1A1 | coding | upstream | 209150 | 2220697 ~ 2232712 (+) |
| CI01000043_02129173_02152417 | NA | coding | upstream | 289195 | 2129173 ~ 2152667 (+) |
| CI01000043_02464522_02485377 | USP10 | coding | downstream | 20812 | 2464522 ~ 2486310 (+) |
| CI01000043_02504537_02519367 | CRISPLD2, CRLD2 | coding | downstream | 58213 | 2501923 ~ 2520632 (+) |
| CI01000043_02787002_02807892 | NA | coding | downstream | 343122 | 2786832 ~ 2808856 (+) |
| CI01000043_02834135_02840882 | NA | coding | downstream | 388339 | 2832049 ~ 2841013 (+) |
| CI01000043_02884506_02898339 | NA | coding | downstream | 440708 | 2884418 ~ 2898364 (+) |
| G190385 | NA | non-coding | upstream | 83210 | 2358347 ~ 2358652 (+) |
| G190233 | NA | non-coding | upstream | 86209 | 2354008 ~ 2355653 (+) |
| G190237 | NA | non-coding | upstream | 147361 | 2291120 ~ 2294501 (+) |
| G190280 | NA | non-coding | upstream | 174333 | 2266336 ~ 2267529 (+) |
| G190369 | NA | non-coding | upstream | 191374 | 2250261 ~ 2250488 (+) |
| G190391 | NA | non-coding | downstream | 6231 | 2449941 ~ 2450276 (+) |
| G190401 | NA | non-coding | downstream | 57064 | 2500774 ~ 2501060 (+) |
| G190408 | NA | non-coding | downstream | 108413 | 2552123 ~ 2552368 (+) |
| G190884 | NA | non-coding | downstream | 168985 | 2612695 ~ 2613477 (+) |
| G190991 | NA | non-coding | downstream | 331898 | 2775608 ~ 2775815 (+) |
| G190241 | NA | other | upstream | 749383 | 1683556 ~ 1692479 (+) |
| G191670 | NA | other | downstream | 1459523 | 3903233 ~ 3909966 (+) |
| G191644 | NA | other | downstream | 1864238 | 4307948 ~ 4350614 (+) |
| G192454 | NA | other | downstream | 2549303 | 4993013 ~ 4993356 (+) |
| CI01000043_05114193_05114497 | BOLA3 | other | downstream | 2670176 | 5114193 ~ 5114497 (+) |
| CI01000043_05169578_05171795 | CLEC3A | other | downstream | 2725895 | 5169578 ~ 5171848 (+) |
