Gene
RNA
| Item | Value |
|---|---|
| gene id | G190861 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000043 |
| NCBI id | null |
| chromosome length | 7746009 |
| location | 2527180 ~ 2527693 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU216777 | True | 514 | lncRNA | 0.42 | 1 | 2527180 | 2527693 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000043_02443106_02445250 | MARVELD3 | coding | downstream | 80873 | 2442964 ~ 2446307 (-) |
| CI01000043_02302020_02310202 | ZNF821 | coding | downstream | 216978 | 2301573 ~ 2310202 (-) |
| CI01000043_02267429_02272738 | ELP5 | coding | downstream | 254442 | 2267201 ~ 2272738 (-) |
| CI01000043_02252982_02264248 | CTDNEP1B, CTDNEP1A, CTDNEP1, DULDA | coding | downstream | 262932 | 2251846 ~ 2264248 (-) |
| CI01000043_02245322_02249390 | GABARAPL1, GABARAP.L, GABARAP, GABARAPA, GABARAPB, BRAFLDRAFT_122660, GBRAP | coding | downstream | 277725 | 2244688 ~ 2249480 (-) |
| CI01000043_02555479_02574821 | HNF4B | coding | upstream | 27581 | 2555274 ~ 2574821 (-) |
| CI01000043_02725571_02730393 | NA | coding | upstream | 197459 | 2725152 ~ 2730860 (-) |
| CI01000043_02868129_02876445 | NA | coding | upstream | 339723 | 2867416 ~ 2876465 (-) |
| CI01000043_02912881_02924260 | NA | coding | upstream | 385183 | 2912876 ~ 2924415 (-) |
| CI01000043_03133480_03136057 | NA | coding | upstream | 605736 | 3133429 ~ 3136325 (-) |
| G190849 | NA | non-coding | downstream | 31492 | 2495474 ~ 2495688 (-) |
| G190847 | NA | non-coding | downstream | 32648 | 2494309 ~ 2494532 (-) |
| G190846 | NA | non-coding | downstream | 33465 | 2493379 ~ 2493715 (-) |
| G190845 | NA | non-coding | downstream | 34151 | 2492793 ~ 2493029 (-) |
| G190844 | NA | non-coding | downstream | 34700 | 2492221 ~ 2492480 (-) |
| G190869 | NA | non-coding | upstream | 20377 | 2548070 ~ 2548300 (-) |
| G190873 | NA | non-coding | upstream | 66621 | 2594314 ~ 2594592 (-) |
| G191299 | NA | non-coding | upstream | 352703 | 2880396 ~ 2884547 (-) |
| G191483 | NA | non-coding | upstream | 623138 | 3150831 ~ 3151071 (-) |
| G191489 | NA | non-coding | upstream | 640204 | 3167897 ~ 3168172 (-) |
| G189881 | NA | other | downstream | 1644012 | 814747 ~ 883168 (-) |
| G191296 | NA | other | upstream | 520679 | 3048372 ~ 3049864 (-) |
| G192109 | NA | other | upstream | 1804218 | 4331911 ~ 4332726 (-) |
| G192980 | NA | other | upstream | 2928804 | 5456497 ~ 5458414 (-) |
| G192947 | NA | other | upstream | 3065988 | 5593681 ~ 5618440 (-) |
| G193313 | NA | other | upstream | 3727879 | 6255572 ~ 6256279 (-) |
