G191117


Basic Information

Item Value
gene id G191117
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 3170835 ~ 3171075 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU217056
TGCAGAGGTCCGGTCTGTGAAATCACTTCCTGTTATATGTTTTTGTGATTTGGTGGACAAAAGTTTTTCAAATATTAATAAGTAATTTTACTAAAATATTATTTTATTTTATTTTTCTTAGAAATATTAATAAAAGATTATGCCAAATTACTTAAGGATTTATTTATTTATTTTTGTCCATTTTTGTCTTGACATTGTCCTTACTGCTCCCAAATATCTTTTAAGGGTTTATGAATTAATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU217056 True 241 lncRNA 0.24 1 3170835 3171075

Neighbor

gene id symbol gene type direction distance location
CI01000043_02945803_03044928 ZFHX3 coding upstream 125907 2945803 ~ 3044928 (+)
CI01000043_02884506_02898339 NA coding upstream 272471 2884418 ~ 2898364 (+)
CI01000043_02834135_02840882 NA coding upstream 329822 2832049 ~ 2841013 (+)
CI01000043_02787002_02807892 NA coding upstream 361979 2786832 ~ 2808856 (+)
CI01000043_02504537_02519367 CRISPLD2, CRLD2 coding upstream 650203 2501923 ~ 2520632 (+)
CI01000043_03270751_03284680 NA coding downstream 99676 3270751 ~ 3284762 (+)
CI01000043_03292361_03301513 NA coding downstream 121286 3292361 ~ 3301513 (+)
CI01000043_03600460_03603309 NA coding downstream 429200 3600275 ~ 3603404 (+)
CI01000043_03630982_03636231 PSMD7, PSD7, PSMD7.L coding downstream 458229 3629304 ~ 3636429 (+)
CI01000043_03678916_03691863 ZNF143A coding downstream 507741 3678816 ~ 3692052 (+)
G191097 NA non-coding upstream 18981 3151627 ~ 3151854 (+)
G191094 NA non-coding upstream 21147 3149204 ~ 3149688 (+)
G191086 NA non-coding upstream 31021 3138396 ~ 3139814 (+)
G191067 NA non-coding upstream 61543 3109039 ~ 3109292 (+)
G191066 NA non-coding upstream 61845 3108649 ~ 3108990 (+)
G191133 NA non-coding downstream 16743 3187818 ~ 3188056 (+)
G191150 NA non-coding downstream 34814 3205889 ~ 3206111 (+)
G191182 NA non-coding downstream 111010 3282085 ~ 3283570 (+)
G191183 NA non-coding downstream 113756 3284831 ~ 3285055 (+)
G191056 NA non-coding downstream 175864 3346939 ~ 3351641 (+)
G190272 NA other upstream 727125 2441862 ~ 2443710 (+)
G190241 NA other upstream 1478356 1683556 ~ 1692479 (+)
G191670 NA other downstream 732158 3903233 ~ 3909966 (+)
G191644 NA other downstream 1136873 4307948 ~ 4350614 (+)
G192454 NA other downstream 1821938 4993013 ~ 4993356 (+)
CI01000043_05114193_05114497 BOLA3 other downstream 1942811 5114193 ~ 5114497 (+)
CI01000043_05169578_05171795 CLEC3A other downstream 1998530 5169578 ~ 5171848 (+)

Expression


Co-expression Network