XLOC_009331


Basic Information

Item Value
gene id XLOC_009331
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 30923150 ~ 30924089 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019204
GTTTCtttcattattgtttattcatgAGTCACTGTAGAATGTCAATATATGATATGGTGAAGGTCATTTAAGATGGCCCATACATGCCTcatttattaattacataaaaataccagtttttaaccattAACATCTGTAGATTAGTAATAATATCACCAATGTCAAATTGAGCAGAAAAGTAGTCCAGACAGTCCCATGATCACCGCAAGCGACAACATAGCAGCAGTGAGTTTCTTTCATGAGTCACTGTAGAATGTCAATAAATGGTAATATGCGGTTCATTTCATAGGAGTCATGCATGCCTCATTTAATAATTACATACGAATACTTGTCCCTAGCCACTAGCATGTGTAGATTAGTGAAAATATCATTTATGTCGGTTGCATAGAAAAGTAGTAGTCCAGACAGACCCATGATTCCCACAAGTGAAAAGGAAGGAGCAATAGAGTTGCCATGGTTTGAGCTCGGAGTTGTCCAGCTTGTGCTGTTGTTGGTTGTGCTGTTGTTGGTTGTGCTGTTGTTGGTTGTGCTGTTGTTGGTTGTGCCGTTGTTGGTTGTGCTGTTGATGGTGATGTTGCTGCTggtcatgttgttgatgccaggaGTGCAGTTGTATATTAAATTTAAGCCATTGACTGTGCAGTTGTTTGTGCAGTTGAATGTTCCATTGGTTATGCATTTGGTTGTGCAGTTGAGTGGTTCGTATGTAGCCGTGTCGATGCCACCAACAGCATTGTAGCTTGTAATCATCACAGCCACTAGCAGCAGTAGAAATTGAGTTTTGGAAGCCATATTCAGGGCTTTCGCT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019204 True 808 lncRNA 0.40 2 30923150 30924089

Neighbor

gene id symbol gene type direction distance location
XLOC_009330 NA coding downstream 7889 30911402 ~ 30915261 (-)
XLOC_009328 akap1b coding downstream 65800 30836981 ~ 30857350 (-)
XLOC_009327 msi2b coding downstream 90253 30424645 ~ 30832897 (-)
XLOC_009326 NA coding downstream 561736 30359330 ~ 30361414 (-)
XLOC_009325 NA coding downstream 600936 30316728 ~ 30322214 (-)
XLOC_009332 lgals9l6 coding upstream 63325 30987414 ~ 31000306 (-)
XLOC_009333 AL928870.1 coding upstream 81892 31005981 ~ 31012712 (-)
XLOC_009334 lgals9l4 coding upstream 97925 31022014 ~ 31027112 (-)
XLOC_009335 lgals9l1 coding upstream 108166 31032255 ~ 31043183 (-)
XLOC_009336 lgals9l3 coding upstream 130111 31054200 ~ 31067589 (-)
XLOC_009324 NA non-coding downstream 617350 30300780 ~ 30305800 (-)
XLOC_009323 NA non-coding downstream 764475 30156924 ~ 30158675 (-)
XLOC_009342 AL928851.2 non-coding upstream 375474 31299563 ~ 31299678 (-)
XLOC_009344 AL928851.1 non-coding upstream 391120 31315209 ~ 31315548 (-)
XLOC_009348 AL845428.2 non-coding upstream 437698 31361787 ~ 31362141 (-)
XLOC_009360 AL929092.1 non-coding upstream 623645 31547734 ~ 31547852 (-)

Expression


Co-expression Network