Gene
RNA
| Item | Value |
|---|---|
| gene id | G191569 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000043 |
| NCBI id | null |
| chromosome length | 7746009 |
| location | 3427477 ~ 3427776 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU217549 | True | 300 | lncRNA | 0.39 | 1 | 3427477 | 3427776 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000043_03377513_03382227 | NA | coding | downstream | 45052 | 3376905 ~ 3382425 (-) |
| CI01000043_03356337_03361772 | CYB5B | coding | downstream | 64334 | 3356051 ~ 3363143 (-) |
| CI01000043_03325623_03351622 | DHX38 | coding | downstream | 74415 | 3325388 ~ 3353062 (-) |
| CI01000043_03138222_03139281 | NA | coding | downstream | 287844 | 3137166 ~ 3139633 (-) |
| CI01000043_03133480_03136057 | NA | coding | downstream | 291152 | 3133429 ~ 3136325 (-) |
| CI01000043_03452739_03529381 | CPNE7 | coding | upstream | 23815 | 3451591 ~ 3529693 (-) |
| CI01000043_03539141_03543311 | CASC3.L, RPL13.S, RPL13 | coding | upstream | 111329 | 3539105 ~ 3543892 (-) |
| CI01000043_03548130_03586519 | KARS | coding | upstream | 120034 | 3547810 ~ 3586936 (-) |
| CI01000043_03636807_03672561 | NA | coding | upstream | 208695 | 3636471 ~ 3672680 (-) |
| CI01000043_03750004_03772251 | NA | coding | upstream | 322066 | 3749842 ~ 3772506 (-) |
| G191539 | NA | non-coding | downstream | 146169 | 3281072 ~ 3281308 (-) |
| G191538 | NA | non-coding | downstream | 155215 | 3272026 ~ 3272262 (-) |
| G191537 | NA | non-coding | downstream | 156249 | 3270999 ~ 3271228 (-) |
| G191536 | NA | non-coding | downstream | 171050 | 3256202 ~ 3256427 (-) |
| G191535 | NA | non-coding | downstream | 173205 | 3253967 ~ 3254272 (-) |
| G191582 | NA | non-coding | upstream | 110494 | 3538270 ~ 3538681 (-) |
| G191601 | NA | non-coding | upstream | 220273 | 3648049 ~ 3648332 (-) |
| G191620 | NA | non-coding | upstream | 268795 | 3696571 ~ 3703622 (-) |
| G191627 | NA | non-coding | upstream | 278381 | 3706157 ~ 3712416 (-) |
| G191826 | NA | non-coding | upstream | 308823 | 3736599 ~ 3737993 (-) |
| G191296 | NA | other | downstream | 377613 | 3048372 ~ 3049864 (-) |
| CI01000043_02245322_02249390 | GABARAPL1, GABARAP.L, GABARAP, GABARAPA, GABARAPB, BRAFLDRAFT_122660, GBRAP | other | downstream | 1177997 | 2244688 ~ 2249480 (-) |
| G189881 | NA | other | downstream | 2544309 | 814747 ~ 883168 (-) |
| G192109 | NA | other | upstream | 904135 | 4331911 ~ 4332726 (-) |
| G192980 | NA | other | upstream | 2028721 | 5456497 ~ 5458414 (-) |
| G192947 | NA | other | upstream | 2165905 | 5593681 ~ 5618440 (-) |
| G193313 | NA | other | upstream | 2827796 | 6255572 ~ 6256279 (-) |
| G193922 | NA | other | upstream | 3135564 | 6563340 ~ 6566039 (-) |
