G191226


Basic Information

Item Value
gene id G191226
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 3447012 ~ 3447221 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU217171
TTTTAATGTAAAACCATTAGTTTATGTCCCTTAAACTCCAGTCCACCCTGTTACATTGGTGCTACTTGCCCTTTAAAATCTTAAACATATGCCCTAAATCACGACTTGCTTGAAGTGACATCATTACTTGGAGGGAAAGCAACTCTAATAACAAATTAAGAATAATTCATAAACGTTTGTCTCTTTTCCTCATTTTTACGTGAATACTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU217171 True 210 lncRNA 0.33 1 3447012 3447221

Neighbor

gene id symbol gene type direction distance location
CI01000043_03292361_03301513 NA coding upstream 145499 3292361 ~ 3301513 (+)
CI01000043_03270751_03284680 NA coding upstream 162250 3270751 ~ 3284762 (+)
CI01000043_03157095_03221503 NA coding upstream 224389 3156717 ~ 3222623 (+)
CI01000043_02945803_03044928 ZFHX3 coding upstream 402084 2945803 ~ 3044928 (+)
CI01000043_02884506_02898339 NA coding upstream 548648 2884418 ~ 2898364 (+)
CI01000043_03600460_03603309 NA coding downstream 153054 3600275 ~ 3603404 (+)
CI01000043_03630982_03636231 PSMD7, PSD7, PSMD7.L coding downstream 182083 3629304 ~ 3636429 (+)
CI01000043_03678916_03691863 ZNF143A coding downstream 231595 3678816 ~ 3692052 (+)
CI01000043_03696702_03699679 NA coding downstream 249249 3696470 ~ 3699879 (+)
CI01000043_03718802_03730935 TRIP4 coding downstream 270739 3717960 ~ 3731638 (+)
G191224 NA non-coding upstream 14118 3432596 ~ 3432894 (+)
G191056 NA non-coding upstream 95371 3346939 ~ 3351641 (+)
G191183 NA non-coding upstream 161957 3284831 ~ 3285055 (+)
G191182 NA non-coding upstream 163442 3282085 ~ 3283570 (+)
G191150 NA non-coding upstream 240901 3205889 ~ 3206111 (+)
G191228 NA non-coding downstream 1944 3449165 ~ 3451134 (+)
G191047 NA non-coding downstream 32065 3479286 ~ 3543374 (+)
G191265 NA non-coding downstream 125025 3572246 ~ 3572572 (+)
G191272 NA non-coding downstream 196516 3643737 ~ 3644012 (+)
G191273 NA non-coding downstream 198617 3645838 ~ 3646264 (+)
G190272 NA other upstream 1003302 2441862 ~ 2443710 (+)
G190241 NA other upstream 1754533 1683556 ~ 1692479 (+)
G191670 NA other downstream 456012 3903233 ~ 3909966 (+)
G191644 NA other downstream 860727 4307948 ~ 4350614 (+)
G192454 NA other downstream 1545792 4993013 ~ 4993356 (+)
CI01000043_05114193_05114497 BOLA3 other downstream 1666665 5114193 ~ 5114497 (+)
CI01000043_05169578_05171795 CLEC3A other downstream 1722384 5169578 ~ 5171848 (+)

Expression


Co-expression Network