G191273


Basic Information

Item Value
gene id G191273
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 3645838 ~ 3646264 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU217227
CGCGTTTTGCAGGTCAGAACCGAGGTCCATGACATAGCCTCCTCCTCTATAAAGTGCAATCATACCCCAAACGGGGATTGCTTTGAGCGTGGACTGGCTTTGGTACTGCCAAGCTGTGATGGTGTCCTCAGAAGCATTTACAAAATTAAACTCTTCCCAACCTGGACCGTAAGAGCCCATATCCTCATTGTCCCAAGAGTAAGGTGCATTGCAGTGGGGAACAGCGTGACGCATGGACTTAGCAATCATACAAGAGTCTCTCGTCACCCTAACTTGACGAAGACGAGCACTCCCAACAAGTTTTGAGTTTCCATCTGTTATAAAACCTTGGAAATAAAAATGAAATAGTCAATAAACACATCAGTCAATAATGCGGCCATTTACTGGAGCTCAATGGGTTGAAACTAAAGCTCTCGAGATCCTCCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU217227 True 427 lncRNA 0.46 1 3645838 3646264

Neighbor

gene id symbol gene type direction distance location
CI01000043_03630982_03636231 PSMD7, PSD7, PSMD7.L coding upstream 9409 3629304 ~ 3636429 (+)
CI01000043_03600460_03603309 NA coding upstream 42434 3600275 ~ 3603404 (+)
CI01000043_03292361_03301513 NA coding upstream 344325 3292361 ~ 3301513 (+)
CI01000043_03270751_03284680 NA coding upstream 361076 3270751 ~ 3284762 (+)
CI01000043_03157095_03221503 NA coding upstream 423215 3156717 ~ 3222623 (+)
CI01000043_03678916_03691863 ZNF143A coding downstream 32552 3678816 ~ 3692052 (+)
CI01000043_03696702_03699679 NA coding downstream 50206 3696470 ~ 3699879 (+)
CI01000043_03718802_03730935 TRIP4 coding downstream 71696 3717960 ~ 3731638 (+)
CI01000043_03733099_03736327 NA coding downstream 86168 3732432 ~ 3736375 (+)
CI01000043_03806399_03849817 ZNF609 coding downstream 158278 3804542 ~ 3850527 (+)
G191272 NA non-coding upstream 1826 3643737 ~ 3644012 (+)
G191265 NA non-coding upstream 73266 3572246 ~ 3572572 (+)
G191047 NA non-coding upstream 102464 3479286 ~ 3543374 (+)
G191228 NA non-coding upstream 194704 3449165 ~ 3451134 (+)
G191226 NA non-coding upstream 198617 3447012 ~ 3447221 (+)
G191275 NA non-coding downstream 2812 3649076 ~ 3649572 (+)
G191277 NA non-coding downstream 4976 3651240 ~ 3651469 (+)
G191278 NA non-coding downstream 5661 3651925 ~ 3652233 (+)
G191281 NA non-coding downstream 9197 3655461 ~ 3655685 (+)
G191669 NA non-coding downstream 264576 3910840 ~ 3911450 (+)
G190272 NA other upstream 1202128 2441862 ~ 2443710 (+)
G190241 NA other upstream 1953359 1683556 ~ 1692479 (+)
G191670 NA other downstream 256969 3903233 ~ 3909966 (+)
G191644 NA other downstream 661684 4307948 ~ 4350614 (+)
G192454 NA other downstream 1346749 4993013 ~ 4993356 (+)
CI01000043_05114193_05114497 BOLA3 other downstream 1467622 5114193 ~ 5114497 (+)
CI01000043_05169578_05171795 CLEC3A other downstream 1523341 5169578 ~ 5171848 (+)

Expression


Co-expression Network