G191643


Basic Information

Item Value
gene id G191643
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 4295512 ~ 4323057 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU217638
AAGAGATGTAAATGAAGAATGTGGGACTTGTTGGAAACATGATTCAGCAGATATTTTTCTGATCCAAAAGAATCGATTCCCAAAATGAATCAGACTTCGCAACACTGAATTGAAGTTACCTACTTCCTATTTTATTGCTCCTCCTTCCTCAAAGGAGAGCAGCAGGCAACTAAATGAAGTAAAATGTAAAATATGAATTGAACAAGTTCCTTTTTCAAGCAACAAAATGTAACTGGCCTTCAGCAAGAGAGTCAATAAATGTGTACATACCAAATCGTATATGATATATTTATTTAAGAAACCATTCAAAAGCAAAAGTAGTCATAACCTTCCCATTACCAGTTTGAGACACTGAAAACACAAAAGACATTCTTTCACAGAGGTAAACAGTATGTGGATGATGTAACAGTCTAAAAATGGGTTTACATTGTACATTTATTAATAAAGGTAGAACCAAAGCCTTTCTGGGGATACATGAATATTAAAATTTACAAACAAACATTGCCATATGTCCAAACAAACAGAGAGTATGTCTTAAGACTTCATTTATTATATTTATATTATATTCATTTCAATTAGAACCACTCTTTTATCACGCTTTTAGACATACATAATTACTTTGAATGGAAGACACATGCAACATATTGTACCAATATATATCGTTTCCATCATCGTTGCCATTTCATTAATGTTGGAATGTCACGATTTAAGACAAGAGAGAAAACATTCAGACAGGCAGACACAAAACTCTGTCCATATGACTCAATATTAAAGGGATAGTTCACCCAAAAATTAAAATTCTGTCATTAATTGCTCAACCTCATGTTGTTCCAAACCTGTAAGACCTTCGGAACACAAATTAAGATATTTTTGATGAAATCTGTGAGCTTTCTGATCTCCCTATAGAACAGCAATGTCATAACCAATTTAAAGGCCCAGAAAAGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU217638 True 947 lncRNA 0.33 2 4295512 4323057

Neighbor

gene id symbol gene type direction distance location
CI01000043_04261984_04277105 PACSIN3 coding upstream 17523 4261984 ~ 4277989 (+)
CI01000043_04227678_04227983 NA coding upstream 67447 4225646 ~ 4228065 (+)
CI01000043_04175414_04178862 NA coding upstream 116511 4174638 ~ 4179001 (+)
CI01000043_04053003_04164783 NEO1A, NEO1 coding upstream 130729 4053003 ~ 4164783 (+)
CI01000043_03945066_03946592 NA coding upstream 348920 3944725 ~ 3946592 (+)
CI01000043_04366197_04369516 NA coding downstream 42364 4365421 ~ 4369996 (+)
CI01000043_04440501_04442850 FGF3 coding downstream 117300 4440357 ~ 4443665 (+)
CI01000043_04450220_04453014 FGF4 coding downstream 126871 4449928 ~ 4453865 (+)
CI01000043_04465956_04468671 NA coding downstream 142791 4465848 ~ 4470176 (+)
CI01000043_04471833_04474152 NA coding downstream 148572 4471629 ~ 4474518 (+)
G191650 NA non-coding upstream 101854 4184368 ~ 4193658 (+)
G191699 NA non-coding upstream 121863 4173357 ~ 4173649 (+)
G191637 NA non-coding upstream 123011 4168797 ~ 4172501 (+)
G191646 NA non-coding upstream 150545 4142194 ~ 4144967 (+)
G191647 NA non-coding upstream 213585 4055224 ~ 4081927 (+)
G191752 NA non-coding downstream 70509 4393566 ~ 4393777 (+)
G191754 NA non-coding downstream 72791 4395848 ~ 4396077 (+)
G191779 NA non-coding downstream 122716 4445773 ~ 4446072 (+)
G192223 NA non-coding downstream 202258 4525315 ~ 4525514 (+)
G192250 NA non-coding downstream 223552 4546609 ~ 4546940 (+)
G191670 NA other upstream 385546 3903233 ~ 3909966 (+)
G190272 NA other upstream 1851802 2441862 ~ 2443710 (+)
G190241 NA other upstream 2603033 1683556 ~ 1692479 (+)
G192454 NA other downstream 669956 4993013 ~ 4993356 (+)
CI01000043_05114193_05114497 BOLA3 other downstream 790829 5114193 ~ 5114497 (+)
CI01000043_05169578_05171795 CLEC3A other downstream 846548 5169578 ~ 5171848 (+)
G192489 NA other downstream 1144260 5467317 ~ 5552624 (+)
G193125 NA other downstream 1882631 6205688 ~ 6210893 (+)

Expression


Co-expression Network