G191779


Basic Information

Item Value
gene id G191779
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 4445773 ~ 4446072 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU217776
CTCCTACTGGCCATATTTGTGGACCTTGTAGAGTTGCTGACCTCTGCACTAACATCACACCATATTGCTTCCAGCTTAACTATTTTTTAAGTGATACCGATTGAGAGTTAAGCTGCAAAATCCTTCATATTTTAGACAAAGCTATTTTTTTTTTTTTTTCTGGGATGTTTTCACAAATACCACAGGCTGCATATGAGACAAATAACGAAAGATGGCTTTGTGAAGATGCCTGTAAGCACAGGCTTTATAAAGTAGTGAAAATAAATTCCACTTGCACACATCCAGCCATTTGCAAATTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU217776 True 300 lncRNA 0.37 1 4445773 4446072

Neighbor

gene id symbol gene type direction distance location
CI01000043_04440501_04442850 FGF3 coding upstream 2108 4440357 ~ 4443665 (+)
CI01000043_04366197_04369516 NA coding upstream 75777 4365421 ~ 4369996 (+)
CI01000043_04261984_04277105 PACSIN3 coding upstream 167784 4261984 ~ 4277989 (+)
CI01000043_04227678_04227983 NA coding upstream 217708 4225646 ~ 4228065 (+)
CI01000043_04175414_04178862 NA coding upstream 266772 4174638 ~ 4179001 (+)
CI01000043_04450220_04453014 FGF4 coding downstream 3856 4449928 ~ 4453865 (+)
CI01000043_04465956_04468671 NA coding downstream 19776 4465848 ~ 4470176 (+)
CI01000043_04471833_04474152 NA coding downstream 25557 4471629 ~ 4474518 (+)
CI01000043_04746456_04753978 DHCR7 coding downstream 299950 4746022 ~ 4754364 (+)
CI01000043_04813811_04816237 NA coding downstream 367291 4813363 ~ 4816743 (+)
G191754 NA non-coding upstream 49696 4395848 ~ 4396077 (+)
G191752 NA non-coding upstream 51996 4393566 ~ 4393777 (+)
G191643 NA non-coding upstream 122716 4295512 ~ 4323057 (+)
G191650 NA non-coding upstream 252115 4184368 ~ 4193658 (+)
G191699 NA non-coding upstream 272124 4173357 ~ 4173649 (+)
G192223 NA non-coding downstream 79243 4525315 ~ 4525514 (+)
G192250 NA non-coding downstream 100537 4546609 ~ 4546940 (+)
G192257 NA non-coding downstream 112398 4558470 ~ 4558883 (+)
G192258 NA non-coding downstream 112848 4558920 ~ 4559124 (+)
G192267 NA non-coding downstream 118499 4564571 ~ 4564929 (+)
G191644 NA other upstream 95159 4307948 ~ 4350614 (+)
G191670 NA other upstream 535807 3903233 ~ 3909966 (+)
G190272 NA other upstream 2002063 2441862 ~ 2443710 (+)
G190241 NA other upstream 2753294 1683556 ~ 1692479 (+)
G192454 NA other downstream 546941 4993013 ~ 4993356 (+)
CI01000043_05114193_05114497 BOLA3 other downstream 667814 5114193 ~ 5114497 (+)
CI01000043_05169578_05171795 CLEC3A other downstream 723533 5169578 ~ 5171848 (+)
G192489 NA other downstream 1021245 5467317 ~ 5552624 (+)
G193125 NA other downstream 1759616 6205688 ~ 6210893 (+)

Expression


Co-expression Network