G192671


Basic Information

Item Value
gene id G192671
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 4617697 ~ 4618031 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU218754
AAGCCTGCAGAGAGTTCACTATGTAAGACAACGGTTCAAATTGTTGAATAAAGTAATTATTTTTCTTTTGTTTTTGCGCTCAAAAAGTATTCTCATCGCTTCATAATAATCAGGTTGAACCACTGTAGTGACATGGACTATTTTAACCATGTTTTTAACTACCTTTCTGGACGTCAAAAGGTGCAGTGTTGTTGCTGCCTATGTGTGGATCAGATACCCTCGGATTTCATCAAAAATATCTTAATTTGTGTTCCGAATATGAACGAAGGTCTTACGGGTTTGGAACGACATGAGGGTGAGTAATTAATGACAGAAATTTCATTTTTTGGGTGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU218754 True 335 lncRNA 0.36 1 4617697 4618031

Neighbor

gene id symbol gene type direction distance location
CI01000043_04486893_04491014 CCND1.L, CCND1, CCND1.S coding downstream 125709 4486601 ~ 4491988 (-)
CI01000043_04297368_04337304 NA coding downstream 280393 4296824 ~ 4337304 (-)
CI01000043_04292518_04294909 NA coding downstream 322788 4292183 ~ 4294909 (-)
CI01000043_04185319_04204509 CSNK1G1 coding downstream 412656 4185108 ~ 4205041 (-)
CI01000043_04168896_04172758 RS17, RPS17.S, RPS17 coding downstream 444939 4168871 ~ 4172758 (-)
CI01000043_04701996_04719324 TPCN2 coding upstream 83965 4701996 ~ 4719324 (-)
CI01000043_04725324_04728884 NA coding upstream 107038 4725069 ~ 4728884 (-)
CI01000043_04738890_04742485 NA coding upstream 120859 4738890 ~ 4743454 (-)
CI01000043_04821316_04858515 MMP15 coding upstream 203043 4818251 ~ 4859482 (-)
CI01000043_04920619_04925317 FAM60AL, FA60A coding upstream 302363 4920394 ~ 4925317 (-)
G192243 NA non-coding downstream 77252 4539694 ~ 4540445 (-)
G192163 NA non-coding downstream 191904 4425466 ~ 4425793 (-)
G192138 NA non-coding downstream 217463 4399946 ~ 4400234 (-)
G192126 NA non-coding downstream 235962 4381532 ~ 4381735 (-)
G192118 NA non-coding downstream 264587 4352884 ~ 4353110 (-)
G192684 NA non-coding upstream 14269 4632300 ~ 4632543 (-)
G192688 NA non-coding upstream 17191 4635222 ~ 4635468 (-)
G192691 NA non-coding upstream 21789 4639820 ~ 4640119 (-)
G192702 NA non-coding upstream 55856 4673887 ~ 4674182 (-)
G192703 NA non-coding upstream 57237 4675268 ~ 4675494 (-)
G192109 NA other downstream 284971 4331911 ~ 4332726 (-)
G191296 NA other downstream 1567833 3048372 ~ 3049864 (-)
CI01000043_02245322_02249390 GABARAPL1, GABARAP.L, GABARAP, GABARAPA, GABARAPB, BRAFLDRAFT_122660, GBRAP other downstream 2368217 2244688 ~ 2249480 (-)
G189881 NA other downstream 3734529 814747 ~ 883168 (-)
G192980 NA other upstream 838466 5456497 ~ 5458414 (-)
G192947 NA other upstream 975650 5593681 ~ 5618440 (-)
G193313 NA other upstream 1637541 6255572 ~ 6256279 (-)
G193922 NA other upstream 1945309 6563340 ~ 6566039 (-)
G194100 NA other upstream 2812855 7494997 ~ 7498973 (-)

Expression


Co-expression Network