G192707


Basic Information

Item Value
gene id G192707
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 4686993 ~ 4687297 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU218790
TTTCATTAGGGCTGGACGATTATGGCCTAAAATCAAAACCTCGATTAATTGAACATTTTAGCTCGATTGCGATTAATGAACGATTATTTTGTTTCTGGGGTTTTTTTTTTTTGCCCTCATAGTTCACTGACAAGGTTTGTACTGTAAATATGCTTGACTATTAAAGGTGGGATATTTTTTCCTATTGAAAGAGAGATCTGACATAACAGCTCACTTTCAGCAGTTATTTTATCTATGGTTCGTAACATTTCTTACAGATTTCTGCTCGTTGTAAATCAGATAAAGATAAATTAGCACAGTACCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU218790 True 305 lncRNA 0.34 1 4686993 4687297

Neighbor

gene id symbol gene type direction distance location
CI01000043_04486893_04491014 CCND1.L, CCND1, CCND1.S coding downstream 195005 4486601 ~ 4491988 (-)
CI01000043_04297368_04337304 NA coding downstream 349689 4296824 ~ 4337304 (-)
CI01000043_04292518_04294909 NA coding downstream 392084 4292183 ~ 4294909 (-)
CI01000043_04185319_04204509 CSNK1G1 coding downstream 481952 4185108 ~ 4205041 (-)
CI01000043_04168896_04172758 RS17, RPS17.S, RPS17 coding downstream 514235 4168871 ~ 4172758 (-)
CI01000043_04701996_04719324 TPCN2 coding upstream 14699 4701996 ~ 4719324 (-)
CI01000043_04725324_04728884 NA coding upstream 37772 4725069 ~ 4728884 (-)
CI01000043_04738890_04742485 NA coding upstream 51593 4738890 ~ 4743454 (-)
CI01000043_04821316_04858515 MMP15 coding upstream 133777 4818251 ~ 4859482 (-)
CI01000043_04920619_04925317 FAM60AL, FA60A coding upstream 233097 4920394 ~ 4925317 (-)
G192704 NA non-coding downstream 11151 4675533 ~ 4675842 (-)
G192703 NA non-coding downstream 11499 4675268 ~ 4675494 (-)
G192702 NA non-coding downstream 12811 4673887 ~ 4674182 (-)
G192691 NA non-coding downstream 46874 4639820 ~ 4640119 (-)
G192688 NA non-coding downstream 51525 4635222 ~ 4635468 (-)
G192712 NA non-coding upstream 6290 4693587 ~ 4693797 (-)
G192764 NA non-coding upstream 178694 4865991 ~ 4866385 (-)
G192772 NA non-coding upstream 193383 4880680 ~ 4880920 (-)
G192776 NA non-coding upstream 198881 4886178 ~ 4886419 (-)
G192109 NA other downstream 354267 4331911 ~ 4332726 (-)
G191296 NA other downstream 1637129 3048372 ~ 3049864 (-)
CI01000043_02245322_02249390 GABARAPL1, GABARAP.L, GABARAP, GABARAPA, GABARAPB, BRAFLDRAFT_122660, GBRAP other downstream 2437513 2244688 ~ 2249480 (-)
G189881 NA other downstream 3803825 814747 ~ 883168 (-)
G192980 NA other upstream 769200 5456497 ~ 5458414 (-)
G192947 NA other upstream 906384 5593681 ~ 5618440 (-)
G193313 NA other upstream 1568275 6255572 ~ 6256279 (-)
G193922 NA other upstream 1876043 6563340 ~ 6566039 (-)
G194100 NA other upstream 2743589 7494997 ~ 7498973 (-)

Expression


Co-expression Network