XLOC_009339 (cuedc1b)


Basic Information

Item Value
gene id XLOC_009339
gene name cuedc1b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 31188016 ~ 31237473 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018362
CTGATACACAACAACACACTGGCTGCTAGTTCCCTTTCAGTGGGGATTTCAGGCGCTGAGCATGAACACGCCGACTGGGTCCCAATCGGTGTCGACAGAGATGATGTACGCCGATGTATACAGTCTTTTAAAGCCCAAGGAAATGAGCGACTAGTGTTTATATTTAGGATAAAGGGGAAAACGGGACGGATTGGGAACGTGCGCTGTGGAGTCTGCTTCTGTTCACCTAGAtttgagCAGAGCTAATGGGGAGATCACGCAGTGGGACACAAAGCTAAAGCGCTCAAGACCAGACCGTCTACTTCCCTCGTGCCGGTGACTCCGTGCTGTCGTGTTGGATGCAGCTTAACAAGCAGAAGAAGAGAAGGAAAGGATTTCTCTCGCTCCAGTGGACTAGATTCTTTATAGTATGATGAAAAAGTGAACTTGCATACTTCCACAAACCAAAGAAACACGTgagagaaacacacagagaagTTTTGTGGGAGACATCAGACACCATCGTTTCCCTTGTGGCGTGGTCGGTCTGGAAGGAAAACGGGGCTCCTGCAGGATGACCAGTCTTTTCCGACGCAGCAACAGTAATGGAGGGTCTCGGGGTGGCGGGGGCTCGGCTGCAGGCGAGCTCAACAACTCTAGGCCCAACCGGCAGGTTCGACGGCTGGAGTTCAACCAGGCTATGGAGGACTTCAAAACCATGTTTCCTACCATGGACTATGAGGTGATCGAGTGTGTACTGCGCTCCAATAATGGTGCTGTGGACGCCACCATCGACCAGCTCCTGCAGATGAGCATTGACGGGCAAGGCTCAGATGACAGCTCAGATTCAGATGACAGCATCCCGCCAGAGattcTTGAACGAACCCTCGAGCCAGACAGCTCAGATGAAGAGCCACCACCTGTCTATTCACCACCAACATatgacatgcatatatatgaCCGGAAATACCCTGAAGCTCCTCCTGTTCCTCCACCCAGATTTGAGGCCCAGCCTCCCCCTGGACACAGGCAAGTACAAGGTTACAAAAACTGGAACCCACCATTACTTGGCAATCTGCCTGATGACTTCCTGCGAATCCTGCCTCAACAGTTAGACAGTATACAGGGCTCTCAGAGTAGCACCTCTAACCcttcctcctccacctcctcctcgtCCACCACAATAGCCCAGAAAGTGGTGGCTGCAGCGGGAACAGCCGCCGGGGCTTCAGAGCAGGAGCGCAAACTAAAGCAATATTTGGAAGATGAACGTATTGCTCTCTTCCTGCAAAACGAAGAGTTCATGAAGGAGCTGCAGAGGAACCGTGAGTTCCTTATTGCGTTGGAAAGAGATCGATTGAAATACGAGTCAAAGAAATCCAAATCCAGTCATTCATCAGCTAGCATGGAGAACTCCTCAGGTGACCACTATGCTTCTGGATCTGTAGAGGCCAGCACAGATGATGCTCTCTTCAGAGACAAGCTAAAGCACATGGGCAAATCAACCAGGAAGAAGCTGTTTGAAATTGCCAGAGGTTTCTCAGAGAAGACGAAGCGGAGGAAGTCTAAAAGGAGAACGCTGCTAAGACATCATTCATTGGGCACAGCCAACTCCACTGCCAACCTTCTAGACGATGTAGAAGGAAACCCATGTGatgaagaacgTCAGCTTAGACGATTGGCTGCACAGGAAGAGGAGGAGCCACAAAAGGAACCACTATCATGATCCCTCGTTGCTGTTGGGAAATTAGGCTTTCCATGGTGACCTGAGAATGACCCATGGCGGAGTGCTCCTTCTGTCAGTGGCTCCGGTGCTTTGCTCAATGCCAAGCAAGACTCCCAGACTCCAGAGGAACAGCCGAGGCAGGACTGACCGTATGATCATTTTGTAGCAGCCTTTTTGCGAGCCTAAGATTATTGTTACCTACATTTGATTACTATTAAAATTATTGTATTGTAA
>TCONS_00018363
AAAGGATTTCTCTCGCTCCAGTGGACTAGATTCTTTATAGTATGATGAAAAAGTGAACTTGCATACTTCCACAAACCAAAGAAACACGTgagagaaacacacagagaagTTTTGTGGGAGACATCAGACACCATCGTTTCCCTTGTGGCGTGGTCGGTCTGGAAGGAAAACGGGGCTCCTGCAGGATGACCAGTCTTTTCCGACGCAGCAACAGTAATGGAGGGTCTCGGGGTGGCGGGGGCTCGGCTGCAGGCGAGCTCAACAACTCTAGGCCCAACCGGCAGGTTCGACGGCTGGAGTTCAACCAGGCTATGGAGGACTTCAAAACCATGTTTCCTACCATGGACTATGAGGTGATCGAGTGTGTACTGCGCTCCAATAATGGTGCTGTGGACGCCACCATCGACCAGCTCCTGCAGATGAGCATTGACGGGCAAGGCTCAGATGACAGCTCAGATTCAGATGACAGCATCCCGCCAGAGattcTTGAACGAACCCTCGAGCCAGACAGCTCAGATGAAGAGCCACCACCTGTCTATTCACCACCAACATatgacatgcatatatatgaCCGGAAATACCCTGAAGCTCCTCCTGTTCCTCCACCCAGATTTGAGGCCCAGCCTCCCCCTGGACACAGGCAAGTACAAGGTTACAAAAACTGGAACCCACCATTACTTGGCAATCTGCCTGATGACTTCCTGCGAATCCTGCCTCAACAGTTAGACAGTATACAGGGCTCTCAGAGTAGCACCTCTAACCcttcctcctccacctcctcctcgtCCACCACAATAGCCCAGAAAGTGGTGGCTGCAGCGGGAACAGCCGCCGGGGCTTCAGAGCAGGAGCGCAAACTAAAGCAATATTTGGAAGATGAACGTATTGCTCTCTTCCTGCAAAACGAAGAGTTCATGAAGGAGCTGCAGAGGAACCGTGAGTTCCTTATTGCGTTGGAAAGAGATCGATTGAAATACGAGTCAAAGAAATCCAAATCCAGTCATTCATCAGCTAGCATGGAGAACTCCTCAGGTGACCACTATGCTTCTGGATCTGTAGAGGCCAGCACAGATGATGCTCTCTTCAGAGACAAGCTAAAGCACATGGGCAAATCAACCAGGAAGAAGCTGTTTGAAATTGCCAGAGGTTTCTCAGAGAAGACGAAGCGGAGGAAGTCTAAAAGGAGAACGCTGCTAAGACATCATTCATTGGGCACAGCCAACTCCACTGCCAACCTTCTAGACGATGTAGAAGGAAACCCATGTGatgaagaacgTCAGCTTAGACGATTGGCTGCACAGGAAGAGGAGGAGCCACAAAAGGAACCACTATCATGATCCCTCGTTGCTGTTGGGAAATTAGGCTTTCCATGGTGACCTGAGAATGACCCATGGCGGAGTGCTCCTTCTGTCAGTGGCTCCGGTGCTTTGCTCAATGCCAAGCAAGACTCCCAGACTCCAGAGGAACAGCCGAGGCAGGACTGACCGTATGATCATTTTGTAGCAGCCTTTTTGCGAGCCTAAGATTATTGTTACCTACATTTGATTACTATTAAAATTATTGTATTGT
>TCONS_00018364
CCTCTGCGGCTGTAGTCTTTCTCTCTGTCCGCTAGGCGGCCGTGTGGCTCTTTGTTCACCCACACAGAGATTGTGGCTGTGACAGATTTTTTCCCATCTCTTTGATTCATCCTGATACACAACAACACACTGGCTGCTAGTTCCCTTTCAGTGGGGATTTCAGGCGCTGAGCATGAACACGCCGACTGGGTCCCAATCGGTGTCGACAGAGATGATGTACGCCGATGTATACAGTCTTTTAAAGCCCAAGGAAATGAGCGACTAGTGTTTATATTTAGGATAAAGGGGAAAACGGGACGGATTGGGAACGTGCGCTGTGGAGTCTGCTTCTGTTCACCTAGACTCTTTGATACGGGGTGTTAGTGACGGGTCAGACACATACTTCACAACAGGAAGTGAGAGTCTTCAGCAGGAAGAtttgagCAGAGCTAATGGGGAGATCACGCAGTGGGACACAAAGCTAAAGCGCTCAAGACCAGACCGTCTACTTCCCTCGTGCCGGTGACTCCGTGCTGTCGTGTTGGATGCAGCTTAACAAGCAGAAGAAGAGAAGGAAAGGATTTCTCTCGCTCCAGTGGACTAGATTCTTTATAGTATGATGAAAAAGTGAACTTGCATACTTCCACAAACCAAAGAAACACGTgagagaaacacacagagaagTTTTGTGGGAGACATCAGACACCATCGTTTCCCTTGTGGCGTGGTCGGTCTGGAAGGAAAACGGGGCTCCTGCAGGATGACCAGTCTTTTCCGACGCAGCAACAGTAATGGAGGGTCTCGGGGTGGCGGGGGCTCGGCTGCAGGCGAGCTCAACAACTCTAGGCCCAACCGGCAGGTTCGACGGCTGGAGTTCAACCAGGCTATGGAGGACTTCAAAACCATGTTTCCTACCATGGACTATGAGGTGATCGAGTGTGTACTGCGCTCCAATAATGGTGCTGTGGACGCCACCATCGACCAGCTCCTGCAGATGAGCATTGACGGGCAAGGCTCAGATGACAGCTCAGATTCAGATGACAGCATCCCGCCAGAGattcTTGAACGAACCCTCGAGCCAGACAGCTCAGATGAAGAGCCACCACCTGTCTATTCACCACCAACATatgacatgcatatatatgaCCGGAAATACCCTGAAGCTCCTCCTGTTCCTCCACCCAGATTTGAGGCCCAGCCTCCCCCTGGACACAGGCAAGTACAAGGTTACAAAAACTGGAACCCACCATTACTTGGCAATCTGCCTGATGACTTCCTGCGAATCCTGCCTCAACAGTTAGACAGTATACAGGGCTCTCAGAGTAGCACCTCTAACCcttcctcctccacctcctcctcgtCCACCACAATAGCCCAGAAAGTGGTGGCTGCAGCGGGAACAGCCGCCGGGGCTTCAGAGCAGGAGCGCAAACTAAAGCAATATTTGGAAGATGAACGTATTGCTCTCTTCCTGCAAAACGAAGAGTTCATGAAGGAGCTGCAGAGGAACCGTGAGTTCCTTATTGCGTTGGAAAGAGATCGATTGAAATACGAGTCAAAGAAATCCAAATCCAGTCATTCATCAGCTAGCATGGAGAACTCCTCAGGTGACCACTATGCTTCTGGATCTGTAGAGGCCAGCACAGATGATGCTCTCTTCAGAGACAAGCTAAAGCACATGGGCAAATCAACCAGGAAGAAGCTGTTTGAAATTGCCAGAGGTTTCTCAGAGAAGACGAAGCGGAGGAAGTCTAAAAGGAGAACGCTGCTAAGACATCATTCATTGGGCACAGCCAACTCCACTGCCAACCTTCTAGACGATGTAGAAGGAAACCCATGTGatgaagaacgTCAGCTTAGACGATTGGCTGCACAGGAAGAGGAGGAGCCACAAAAGGAACCACTATCATGA
>TCONS_00018366
CCTCTGCGGCTGTAGTCTTTCTCTCTGTCCGCTAGGCGGCCGTGTGGCTCTTTGTTCACCCACACAGAGATTGTGGCTGTGACAGATTTTTTCCCATCTCTTTGATTCATCCTGATACACAACAACACACTGGCTGCTAGTTCCCTTTCAGTGGGGATTTCAGGCGCTGAGCATGAACACGCCGACTGGGTCCCAATCGGTGTCGACAGAGATGATGTACGCCGATGTATACAGTCTTTTAAAGCCCAAGGAAATGAGCGACTAGTGTTTATATTTAGGATAAAGGGGAAAACGGGACGGATTGGGAACGTGCGCTGTGGAGTCTGCTTCTGTTCACCTAGACTCTTTGATACGGGGTGTTAGTGACGGGTCAGACACATACTTCACAACAGGAAGTGAGAGTCTTCAGCAGGAAGAtttgagCAGAGCTAATGGGGAGATCACGCAGTGGGACACAAAGCTAAAGCGCTCAAGACCAGACCGTCTACTTCCCTCGTGCCGGTGACTCCGTGCTGTCGTGTTGGATGCAGCTTAACAAGCAGAAGAAGAGAAGGAAAGGATTTCTCTCGCTCCAGTGGACTAGATTCTTTATAGTATGATGAAAAAGTGAACTTGCATACTTCCACAAACCAAAGAAACACGTgagagaaacacacagagaagTTTTGTGGGAGACATCAGACACCATCGTTTCCCTTGTGGCGTGGTCGGTCTGGAAGGAAAACGGGGCTCCTGCAGGATGACCAGTCTTTTCCGACGCAGCAACAGTAATGGAGGGTCTCGGGGTGGCGGGGGCTCGGCTGCAGGCGAGCTCAACAACTCTAGGCCCAACCGGCAGGTTCGACGGCTGGAGTTCAACCAGGCTATGGAGGACTTCAAAACCATGTTTCCTACCATGGACTATGAGGTGATCGAGTGTGTACTGCGCTCCAATAATGGTGCTGTGGACGCCACCATCGACCAGCTCCTGCAGATGAGCATTGACGGGCAAGGCTCAGATGACAGCTCAGATTCAGATGACAGCATCCCGCCAGAGattcTTGAACGAACCCTCGAGCCAGACAGCTCAGATGAAGAGCCACCACCTGTCTATTCACCACCAACATatgacatgcatatatatgaCCGGAAATACCCTGAAGCTCCTCCTGTTCCTCCACCCAGATTTGAGGCCCAGCCTCCCCCTGGACACAGGCAAGTACAAGGTTACAAAAACTGGAACCCACCATTACTTGGCAATCTGCCTGATGACTTCCTGCGAATCCTGCCTCAACAGTTAGACAGTATACAGGGCTCTCAGAGTAGCACCTCTAACCcttcctcctccacctcctcctcgtCCACCACAATAGCCCAGAAAGTGGTGGCTGCAGCGGGAACAGCCGCCGGGGCTTCAGAGCAGGAGCGCAAACTAAAGCAATATTTGGAAGATGAACGTATTGCTCTCTTCCTGCAAAACGAAGAGTTCATGAAGGAGCTGCAGAGGAACCGTGAGTTCCTTATTGCGTTGGAAAGAGATCGATTGAAATACGAGTCAAAGAAATCCAAATCCAGTCATTCATCAGCTAGCATGGAGAACTCCTCAGGTGACCACTATGCTTCTGGATCTGTAGAGGCCAGCACAGATGATGCTCTCTTCAGAGACAAGCTAAAGCACATGGGCAAATCAACCAGGAAGAAGCTGTTTGAAATTGCCAGAGGTTTCTCAGAGAAGACGAAGCGGAGGAAGTCTAAAAGGAGAACGCTGCTAAGACATCATTCATTGGGCACAGCCAACTCCACTGCCAACCTTCTAGACGATGTAGAAGGAAACCCATGTGatgaagaacgTCAGCTTAGACGATTGGCTGCACAGGAAGAGGAGGAGCCACAAAAGGAACCACTATCATGGTAA
>TCONS_00018365
CCTCTGCGGCTGTAGTCTTTCTCTCTGTCCGCTAGGCGGCCGTGTGGCTCTTTGTTCACCCACACAGAGATTGTGGCTGTGACAGATTTTTTCCCATCTCTTTGATTCATCCTGATACACAACAACACACTGGCTGCTAGTTCCCTTTCAGTGGGGATTTCAGGCGCTGAGCATGAACACGCCGACTGGGTCCCAATCGGTGTCGACAGAGATGATGTACGCCGATGTATACAGTCTTTTAAAGCCCAAGGAAATGAGCGACTAGTGTTTATATTTAGGATAAAGGGGAAAACGGGACGGATTGGGAACGTGCGCTGTGGAGTCTGCTTCTGTTCACCTAGAtttgagCAGAGCTAATGGGGAGATCACGCAGTGGGACACAAAGCTAAAGCGCTCAAGACCAGACCGTCTACTTCCCTCGTGCCGGTGACTCCGTGCTGTCGTGTTGGATGCAGCTTAACAAGCAGAAGAAGAGAAGGAAAGGATTTCTCTCGCTCCAGTGGACTAGATTCTTTATAGTATGATGAAAAAGTGAACTTGCATACTTCCACAAACCAAAGAAACACGTgagagaaacacacagagaagTTTTGTGGGAGACATCAGACACCATCGTTTCCCTTGTGGCGTGGTCGGTCTGGAAGGAAAACGGGGCTCCTGCAGGATGACCAGTCTTTTCCGACGCAGCAACAGTAATGGAGGGTCTCGGGGTGGCGGGGGCTCGGCTGCAGGCGAGCTCAACAACTCTAGGCCCAACCGGCAGGTTCGACGGCTGGAGTTCAACCAGGCTATGGAGGACTTCAAAACCATGTTTCCTACCATGGACTATGAGGTGATCGAGTGTGTACTGCGCTCCAATAATGGTGCTGTGGACGCCACCATCGACCAGCTCCTGCAGATGAGCATTGACGGGCAAGGCTCAGATGACAGCTCAGATTCAGATGACAGCATCCCGCCAGAGattcTTGAACGAACCCTCGAGCCAGACAGCTCAGATGAAGAGCCACCACCTGTCTATTCACCACCAACATatgacatgcatatatatgaCCGGAAATACCCTGAAGCTCCTCCTGTTCCTCCACCCAGATTTGAGGCCCAGCCTCCCCCTGGACACAGGCAAGTACAAGGTTACAAAAACTGGAACCCACCATTACTTGGCAATCTGCCTGATGACTTCCTGCGAATCCTGCCTCAACAGTTAGACAGTATACAGGGCTCTCAGAGTAGCACCTCTAACCcttcctcctccacctcctcctcgtCCACCACAATAGCCCAGAAAGTGGTGGCTGCAGCGGGAACAGCCGCCGGGGCTTCAGAGCAGGAGCGCAAACTAAAGCAATATTTGGAAGATGAACGTATTGCTCTCTTCCTGCAAAACGAAGAGTTCATGAAGGAGCTGCAGAGGAACCGTGAGTTCCTTATTGCGTTGGAAAGAGATCGATTGAAATACGAGTCAAAGAAATCCAAATCCAGTCATTCATCAGCTAGCATGGAGAACTCCTCAGGTGACCACTATGCTTCTGGATCTGTAGAGGCCAGCACAGATGATGCTCTCTTCAGAGACAAGCTAAAGCACATGGGCAAATCAACCAGGAAGAAGCTGTTTGAAATTGCCAGAGGTTTCTCAGAGAAGACGAAGCGGAGGAAGTCTAAAAGGAGAACGCTGCTAAGACATCATTCATTGGGCACAGCCAACTCCACTGCCAACCTTCTAGACGATGTAGAAGGAAACCCATGTGatgaagaacgTCAGCTTAGACGATTGGCTGCACAGGAAGAGGAGGAGCCACAAAAGGAACCACTATCATGGTAA
>TCONS_00018367
GTGACAGATTTTTTCCCATCTCTTTGATTCATCCTGATACACAACAACACACTGGCTGCTAGTTCCCTTTCAGTGGGGATTTCAGGCGCTGAGCATGAACACGCCGACTGGGTCCCAATCGGTGTCGACAGAGATGATGTACGCCGATGTATACAGTCTTTTAAAGCCCAAGGAAATGAGCGACTAGTGTTTATATTTAGGATAAAGGGGAAAACGGGACGGATTGGGAACGTGCGCTGTGGAGTCTGCTTCTGTTCACCTAGAtttgagCAGAGCTAATGGGGAGATCACGCAGTGGGACACAAAGCTAAAGCGCTCAAGACCAGACCGTCTACTTCCCTCGTGCCGGTGACTCCGTGCTGTCGTGTTGGATGCAGCTTAACAAGCAGAAGAAGAGAAGGAAAGGATTTCTCTCGCTCCAGTGGACTAGATTCTTTATAGTATGATGAAAAAGTGAACTTGCATACTTCCACAAACCAAAGAAACACGTgagagaaacacacagagaagTTTTGTGGGAGACATCAGACACCATCGTTTCCCTTGTGGCGTGGTCGGTCTGGAAGGAAAACGGGGCTCCTGCAGGATGACCAGTCTTTTCCGACGCAGCAACAGTAATGGAGGGTCTCGGGGTGGCGGGGGCTCGGCTGCAGATGAGCATTGACGGGCAAGGCTCAGATGACAGCTCAGATTCAGATGACAGCATCCCGCCAGAGattcTTGAACGAACCCTCGAGCCAGACAGCTCAGATGAAGAGCC

Function

symbol description
cuedc1b Predicted to enable ubiquitin binding activity. Orthologous to human CUEDC1 (CUE domain containing 1).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005575 cellular_component cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070424-29 Predicted to enable ubiquitin binding activity. Orthologous to human CUEDC1 (CUE domain containing 1).

Ensembl:

ensembl_id ENSDARG00000054748

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018362 False 1939 mRNA 0.50 11 31188016 31237362
TCONS_00018363 False 1569 mRNA 0.50 10 31188018 31213119
TCONS_00018364 False 1891 mRNA 0.50 12 31188250 31237473
TCONS_00018366 False 1894 mRNA 0.50 11 31188434 31237473
TCONS_00018365 False 1819 mRNA 0.50 10 31188434 31237473
TCONS_00018367 True 760 processed_transcript 0.50 4 31206438 31237395

Neighbor

gene id symbol gene type direction distance location
XLOC_009338 wsb1 coding downstream 10692 31161783 ~ 31177324 (-)
XLOC_009337 ksr1b coding downstream 40694 31070603 ~ 31147322 (-)
XLOC_009336 lgals9l3 coding downstream 120427 31054200 ~ 31067589 (-)
XLOC_009335 lgals9l1 coding downstream 144833 31032255 ~ 31043183 (-)
XLOC_009334 lgals9l4 coding downstream 160904 31022014 ~ 31027112 (-)
XLOC_009340 vezf1b coding upstream 6552 31244025 ~ 31265375 (-)
XLOC_009341 zgc:171927 coding upstream 44747 31282220 ~ 31287970 (-)
XLOC_009342 AL928851.2 coding upstream 62090 31299563 ~ 31299678 (-)
XLOC_009343 or118-1 coding upstream 74243 31311716 ~ 31313932 (-)
XLOC_009344 AL928851.1 coding upstream 77736 31315209 ~ 31315548 (-)
XLOC_009333 AL928870.1 non-coding downstream 175304 31005981 ~ 31012712 (-)
XLOC_009331 NA non-coding downstream 263927 30923150 ~ 30924089 (-)
XLOC_009330 NA non-coding downstream 272755 30911402 ~ 30915261 (-)
XLOC_009326 NA non-coding downstream 826602 30359330 ~ 30361414 (-)
XLOC_009325 NA non-coding downstream 865802 30316728 ~ 30322214 (-)
XLOC_009348 AL845428.2 non-coding upstream 124314 31361787 ~ 31362141 (-)
XLOC_009360 AL929092.1 non-coding upstream 310261 31547734 ~ 31547852 (-)
XLOC_009362 CR388091.1 non-coding upstream 825819 32063292 ~ 32063409 (-)

Expression


Co-expression Network