G192812


Basic Information

Item Value
gene id G192812
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 5111843 ~ 5112946 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU218899
TCTTTAAAAAATAAATAACATTTATATTGTCACGAATGTGGCTTCCGCGCCTCCTCCTCCGCACCACCGGAGGGAGCCATCACCTGAATATTGACTGTTCCCATTCGGACTACGTTTCCCATAGGCCCTCATTCCTGGGACTGATTGCGCACACCTGCACCTCATCACACACACACACACACACACACTCACTCACTCACTCACTCACACTCACCGCGAAGTCTTGATTTGCCCCGGTGATCATTACTGAGCGTTTTCTTGTGGACTGTTTACTCTGTTACCGTTGGACTGTTTATTCTCTGTGATTCTCTGCTGCCTGCCCTGAACTTTGCCTGTGACCCGATACTGTTTGTCTGTCGCCTGCCTCGACCATTGCCTGTCCCTGTTTATGTCTTTGCCCCTGTCTGCCTTGGTGATTGTTCTAATAAAAGCTGCAAATGGATCCCCATTCTGCCGACCCTTCATTACATATATATATAGTGTTATAAGTAGGAGAGTTCAGACTTTTTATTGGTTTCGTACACGATTTAAGAGAATAAAGATGGGCCTGCCAATCTATTGTTTTATTTTTTTTCCATATAAGGTGAGATTTTTAGCTCAACTAACAACACATGACTTAAAGCCATTTGCATGGTACGAAAACGGTGTAACCTTCTTGTATTTTTCAATATACAGTATATTTTTGTAACCAGCTCATCAAAATATCAACATTTACAGGACATTCTCCATCTCTGTCATTAGATCAGACAGGAAACTCTTAACTACTGTCTGGTATGAAGTAGCCGTGCATGTCCATGTGAAAATCTACATCTACACAAGCCCGCGCAACTTCTTTGAAAGACTTGCCATCAAGCAGCAGCAGAAAGCCACCCTCCTTTGGTTTGGCGTTTATGACAACTGTCAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU218899 True 904 lncRNA 0.43 2 5111843 5112946

Neighbor

gene id symbol gene type direction distance location
CI01000043_05075648_05078780 NA coding downstream 33047 5075648 ~ 5078796 (-)
CI01000043_05064629_05069974 NA coding downstream 41869 5064614 ~ 5069974 (-)
CI01000043_05047820_05058629 NA coding downstream 53214 5047820 ~ 5058629 (-)
CI01000043_04998580_05006966 TMEM41B coding downstream 104877 4997896 ~ 5006966 (-)
CI01000043_04928149_04970788 DENND5A coding downstream 141055 4928134 ~ 4970788 (-)
CI01000043_05220978_05232290 DKK3A coding upstream 107367 5220313 ~ 5232290 (-)
CI01000043_05447820_05448121 NA coding upstream 334462 5446816 ~ 5450393 (-)
CI01000043_05552260_05560675 BTBD10B, BTBD10 coding upstream 438853 5551799 ~ 5560675 (-)
CI01000043_05567462_05568782 PTH1B coding upstream 454425 5567371 ~ 5568980 (-)
CI01000043_05620626_05686035 GALNT18B, GALNT18 coding upstream 507680 5620626 ~ 5686035 (-)
G192654 NA non-coding downstream 67348 5040141 ~ 5044495 (-)
G192785 NA non-coding downstream 118870 4952748 ~ 4992973 (-)
G192776 NA non-coding downstream 225424 4886178 ~ 4886419 (-)
G192772 NA non-coding downstream 230923 4880680 ~ 4880920 (-)
G192764 NA non-coding downstream 245458 4865991 ~ 4866385 (-)
G192820 NA non-coding upstream 6106 5119052 ~ 5122115 (-)
G192813 NA non-coding upstream 47122 5160068 ~ 5160451 (-)
G192815 NA non-coding upstream 48229 5161175 ~ 5162326 (-)
G192836 NA non-coding upstream 51393 5164339 ~ 5197468 (-)
G192858 NA non-coding upstream 82523 5195469 ~ 5199638 (-)
G192109 NA other downstream 779117 4331911 ~ 4332726 (-)
G191296 NA other downstream 2061979 3048372 ~ 3049864 (-)
CI01000043_02245322_02249390 GABARAPL1, GABARAP.L, GABARAP, GABARAPA, GABARAPB, BRAFLDRAFT_122660, GBRAP other downstream 2862363 2244688 ~ 2249480 (-)
G189881 NA other downstream 4228675 814747 ~ 883168 (-)
G192980 NA other upstream 343551 5456497 ~ 5458414 (-)
G192947 NA other upstream 480735 5593681 ~ 5618440 (-)
G193313 NA other upstream 1142626 6255572 ~ 6256279 (-)
G193922 NA other upstream 1450394 6563340 ~ 6566039 (-)
G194100 NA other upstream 2317940 7494997 ~ 7498973 (-)

Expression


Co-expression Network