G192836



Basic Information


Item Value
gene id G192836
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 5164339 ~ 5197468 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU218925
TTCCCATAGTGCATCCTGGTGCCATGTGTTCCCCAGGTAAGCGACGCACACGCACCCGGCCATCCACGTGATGTAAAAGAAAATGTGATTCATCAGACCAGGCCACCTTCTTCCATTGCTCCGTGGTCCAGTTCTGATGCTCACGTGCCCACTGTTGGCTCTTTCGGCGGTGGACAGGGGTCAGCATGGGCACCCTGACTGGTCTGCGGCTATGTAGCCCCATACGCAACAAACTGCGATGCACTGTGTATTCTGACACCTTTCTATCAGAACCAGCATTAACTTCTTGAGCAATTTGAGTTGAACTTGAGCAACAGTAGCTCGTCTGTTGGATCGGACCACACGGGCCAGCCTTCGCTCCCCGCGTGCATCAGTGAGCCTTGGCAGCCCATGACCCTGTCGCTGGTTCACCACTGTTCCTTCCTTGGACCACTTTTGATAGATACTGACCACTGCAGACAATGTAAGGCTGAACACCGTTACTGACAATCCTCATTTTGGCTGCGTGAGATTCTCCAGCTTTGATGTTGTTGAGCAACCGAGCTGTTAAAGCTCCGCCCTCTTCTGGAAAGGGGGCCGGGAGCAGCACCTCATTTGCATTTAAAGGGACACACAAAAACGGCATGTTTTTG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU218925 True 632 lncRNA 0.53 2 5164339 5197468

Neighbor


gene id symbol gene type direction distance location
CI01000043_05075648_05078780 NA coding downstream 85543 5075648 ~ 5078796 (-)
CI01000043_05064629_05069974 NA coding downstream 94365 5064614 ~ 5069974 (-)
CI01000043_05047820_05058629 NA coding downstream 105710 5047820 ~ 5058629 (-)
CI01000043_04998580_05006966 TMEM41B coding downstream 157373 4997896 ~ 5006966 (-)
CI01000043_04928149_04970788 DENND5A coding downstream 193551 4928134 ~ 4970788 (-)
CI01000043_05220978_05232290 DKK3A coding upstream 22845 5220313 ~ 5232290 (-)
CI01000043_05447820_05448121 NA coding upstream 249940 5446816 ~ 5450393 (-)
CI01000043_05552260_05560675 BTBD10B, BTBD10 coding upstream 354331 5551799 ~ 5560675 (-)
CI01000043_05567462_05568782 PTH1B coding upstream 369903 5567371 ~ 5568980 (-)
CI01000043_05620626_05686035 GALNT18B, GALNT18 coding upstream 423158 5620626 ~ 5686035 (-)
G192815 NA non-coding downstream 2013 5161175 ~ 5162326 (-)
G192813 NA non-coding downstream 3888 5160068 ~ 5160451 (-)
G192820 NA non-coding downstream 42224 5119052 ~ 5122115 (-)
G192817 NA non-coding downstream 50807 5109408 ~ 5113532 (-)
G192812 NA non-coding downstream 51393 5111843 ~ 5112946 (-)
G192851 NA non-coding upstream 76253 5273721 ~ 5282134 (-)
G192859 NA non-coding upstream 90353 5287821 ~ 5294704 (-)
G192852 NA non-coding upstream 97662 5295130 ~ 5299604 (-)
G192847 NA non-coding upstream 106774 5304242 ~ 5307924 (-)
G192906 NA non-coding upstream 111047 5308515 ~ 5308880 (-)
G192109 NA other downstream 831613 4331911 ~ 4332726 (-)
G191296 NA other downstream 2114475 3048372 ~ 3049864 (-)
CI01000043_02245322_02249390 GABARAPL1, GABARAP.L, GABARAP, GABARAPA, GABARAPB, BRAFLDRAFT_122660, GBRAP other downstream 2914859 2244688 ~ 2249480 (-)
G189881 NA other downstream 4281171 814747 ~ 883168 (-)
G192980 NA other upstream 259029 5456497 ~ 5458414 (-)
G192947 NA other upstream 396213 5593681 ~ 5618440 (-)
G193313 NA other upstream 1058104 6255572 ~ 6256279 (-)
G193922 NA other upstream 1365872 6563340 ~ 6566039 (-)
G194100 NA other upstream 2233418 7494997 ~ 7498973 (-)

Expression



Co-expression Network