G192489



Basic Information


Item Value
gene id G192489
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 5467317 ~ 5552624 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU218539
TGGACACCCCTGATTTACACTGTAACAAATAATTAATAAAAAATTAATTGAAATTACTTGTACAGCCAATTTGATTATACTTAAAAATTTAAGGCAACGACTGAACTTGTTAAGTTGAAGTAGGATTTTTTTACAGTTTTTTTTTTTTTTTTTTTTTTTTTATTATATTATATATCTTTATTAATACAATGATTTTCAAGCGCTTGAACAGACAGATCTTGAGCAGATAAATTAATGTCCACCTAAGAAAAACACTGCATTTATTCACCAGGCAAAAGAACCTCCTGAGGAGATCAAGGGGGGGGAAGCTTTCCAAAAGAAAAAAGTGGCACCAAACCCAAATGCAACAAGTGAAAGGAACTTCATAATATTAATAATAATTAAACTCATTGCAGTAATAATATAGTCAAATGGAAAAGAACAGTAATTATAATCATATAATAGGCCCAATTACAAAATAAGTGAGGTTGCTAACTTCATTTCAAACAAACAAAAATAAATTTCCTTTGGTCAAGTAAAAAAAGAGAACAGCGAAGACGAAACAAGAGAGCACTGCCCATGCCAGTATCCCATGTCCACGGTGTATTTTTTTTCCTTTTCTTTTTAAATACAGTAACTAGACAGTTGAGGCTCTAAGGCTGTGGAGGAGGTGCAGAAGGCAATCTGGTTATAGTGTCACTCTGGTTCATGCTGCAGCATGCTGTGAAAGGGCGTCTGCTCTCAGACGGCAGGCGAGGGGGCGTCGGGGTCGGGCTCGTTGTTGAAGTTGTTGCTGTAGTGTTGACCGGGGGGAGGGTGGTTGGGAAGAATGTCCAGTTCATCCACCTGTGGTCCGGGGTGCATCACCACAAGCTGGTCCTGGGGAATGTCTGCCGCGGCCGCTGCCAGGTTCGTGATGGACTTGCTTTTCACGCACTGGAAGTCCACGTGTCGACTCTTGCCTTCCTCCTTTTCCCAGGACATGCGGATGAAGGGTCTTTGGACGTAGTTGTAGATGACTTCAGGTCGACCACCGGGACGCTTTTTCACCTTCTCTTTGTATGTTGGATAACCTACAAATGCAGATTTGATATTCAAAAGTTTTG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU218539 True 1085 TUCP 0.40 2 5467317 5552624

Neighbor


gene id symbol gene type direction distance location
CI01000043_05456697_05458046 RASSF10B coding upstream 8251 5456697 ~ 5459066 (+)
CI01000043_05410812_05446376 TEAD1B, TEAD1, TEAD1.S coding upstream 20910 5410667 ~ 5446407 (+)
CI01000043_05388826_05406208 NA coding upstream 60433 5387652 ~ 5406884 (+)
CI01000043_05368751_05369299 NA coding upstream 97681 5368345 ~ 5369636 (+)
CI01000043_05334800_05345427 PARVA, PARVAB coding upstream 121570 5334800 ~ 5345747 (+)
CI01000043_05733124_05733576 NA coding downstream 178285 5730909 ~ 5734169 (+)
CI01000043_05805949_05812765 NA coding downstream 253325 5805949 ~ 5813413 (+)
CI01000043_05878193_05890573 EIF4G2B, EIF4G2, EIF4G2A coding downstream 325569 5878193 ~ 5891182 (+)
CI01000043_05955025_05979049 NA coding downstream 402401 5955025 ~ 5979592 (+)
CI01000043_05984116_05984828 NA coding downstream 431077 5983701 ~ 5984828 (+)
G192493 NA non-coding upstream 17158 5447226 ~ 5450159 (+)
G192529 NA non-coding upstream 236154 5230935 ~ 5231163 (+)
G192499 NA non-coding upstream 306414 5160676 ~ 5160903 (+)
G192495 NA non-coding upstream 306873 5160067 ~ 5160444 (+)
CI01000043_05099471_05111989 BCO1 non-coding upstream 366920 5095725 ~ 5112379 (+)
G192581 NA non-coding downstream 14551 5567175 ~ 5567801 (+)
G193100 NA non-coding downstream 369141 5921765 ~ 5922037 (+)
G193071 NA non-coding downstream 450776 6003400 ~ 6017005 (+)
G193086 NA non-coding downstream 560436 6113060 ~ 6115182 (+)
CI01000043_05169578_05171795 CLEC3A other upstream 295587 5169578 ~ 5171848 (+)
CI01000043_05114193_05114497 BOLA3 other upstream 348869 5114193 ~ 5114497 (+)
G192454 NA other upstream 473961 4993013 ~ 4993356 (+)
G191644 NA other upstream 1116703 4307948 ~ 4350614 (+)
G191670 NA other upstream 1557351 3903233 ~ 3909966 (+)
G193125 NA other downstream 653064 6205688 ~ 6210893 (+)
G193344 NA other downstream 757528 6310152 ~ 6310538 (+)
G193422 NA other downstream 1091517 6644141 ~ 6648342 (+)
G193584 NA other downstream 1379352 6931976 ~ 6934847 (+)
G193636 NA other downstream 1939313 7491937 ~ 7597959 (+)

Expression



Co-expression Network