G192947


Basic Information

Item Value
gene id G192947
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 5593681 ~ 5618440 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU219049
GCTAACAGACCAAAGGCATGAAATCAGAATGAAACAATTGCTATCATGTTCGGCAGGCTGTGAAAAACTTTGCAAGCAATGCCTTTCATGTTTTAACAAACAGAAGAGTTTCATTCAAAAAAAAAAGAAGAAAAAAAGAAACTCTTCTAAAGAGCCAAACTCAGACCCATCAGTAAACTTGAGTGAAAAAGAACCCACTGGACTCAGCTCTTTTGATGGTCCACTTTGGTGTCTCGGTCCACTCTAATTGAATTAATTTCATTAATTATTTTTTGAACACAGTTAAATTGAATATGATTCCAATATGCAAAGGTGAAGTATATACATGATCAGGCATAACATTATGTCCACTGACAGTTGAAGTGAATAACACTGATTATCTCTTCATCACGGTACCTGTTAGTGGGTGGGATATATTAGGCAGCAAGTGAACATTTTGTCCTCAAAGTTGATGTGTTAGAAGCAGGAGAAATGGGCAAGCGTAAGGATTTGAGTGAGTTTGACAAGGGCCAAATTGTGATGGCTAGACGACTGGGTCAGAGCATCTCCAAAACTGCAGCTCTTGTTGGGTGTTCCCGGTCTGCAGTGGTCAGTATCTATCAAAAGTGCTCCAAGGAAGGAACAGTGGTGAACCGACGACAGGGTCATGGGTGGCCGAGGCTCATTGATGCACATGTGGTCCGATCCAACAGACGAGCTTCTGTAGCCGGGTGCGTGTGCGTCTCTTACCTGGGGAACACATGGCACCAGGATGCACTATGGGAAGAAGGCAAACCGGCGGAGGCAGTGTGATGCTTTGGGCAATGTTCTGCTGGGAAACCTTGGGTCCTGCCATCCATGTGGATGTTACTTTGACACGTACCACCTACCTAAGCATTGTTGCAGACCATGTACACCCTTTCATGGAAGCGGTATTCCCTGGTGGCTGTGGCCTCTTTCAGCAGGATAATGCGCCCTGCCACAAAGCAAAAATGGTTCAGGAATGGTTTGAGGAGCACAACAACGAGTTTGAGGTGTTGACTTGGCCTCCAAATTCCCCAGATCTCAATCCAATCGAGCATCTGTGGGATGTGCTGAACAAACAAGTCCGATCCATGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU219049 True 1100 TUCP 0.45 2 5593681 5618440

Neighbor

gene id symbol gene type direction distance location
CI01000043_05567462_05568782 PTH1B coding downstream 24701 5567371 ~ 5568980 (-)
CI01000043_05552260_05560675 BTBD10B, BTBD10 coding downstream 33006 5551799 ~ 5560675 (-)
CI01000043_05447820_05448121 NA coding downstream 145560 5446816 ~ 5450393 (-)
CI01000043_05220978_05232290 DKK3A coding downstream 361391 5220313 ~ 5232290 (-)
CI01000043_05075648_05078780 NA coding downstream 514885 5075648 ~ 5078796 (-)
CI01000043_05620626_05686035 GALNT18B, GALNT18 coding upstream 2186 5620626 ~ 5686035 (-)
CI01000043_05736025_05736195 NA coding upstream 115965 5734405 ~ 5736195 (-)
CI01000043_05898219_05903612 CTR9 coding upstream 279779 5898219 ~ 5903612 (-)
CI01000043_05992881_06008325 AMPD3, AMPD3A, AMPD3B coding upstream 374358 5992798 ~ 6008351 (-)
CI01000043_06014651_06016474 ADMA coding upstream 395970 6014410 ~ 6017018 (-)
G192986 NA non-coding downstream 53919 5533344 ~ 5539762 (-)
G193000 NA non-coding downstream 81550 5510861 ~ 5512131 (-)
G192981 NA non-coding downstream 133071 5460324 ~ 5460610 (-)
G192934 NA non-coding downstream 155227 5424092 ~ 5438454 (-)
G193039 NA non-coding upstream 145591 5764031 ~ 5764256 (-)
G193058 NA non-coding upstream 172836 5791276 ~ 5791490 (-)
G193168 NA non-coding upstream 215751 5834191 ~ 5834759 (-)
G193171 NA non-coding upstream 230995 5849435 ~ 5849695 (-)
G193172 NA non-coding upstream 232039 5850479 ~ 5850734 (-)
G192980 NA other downstream 135267 5456497 ~ 5458414 (-)
G192109 NA other downstream 1260955 4331911 ~ 4332726 (-)
G191296 NA other downstream 2543817 3048372 ~ 3049864 (-)
CI01000043_02245322_02249390 GABARAPL1, GABARAP.L, GABARAP, GABARAPA, GABARAPB, BRAFLDRAFT_122660, GBRAP other downstream 3344201 2244688 ~ 2249480 (-)
G189881 NA other downstream 4710513 814747 ~ 883168 (-)
G193313 NA other upstream 637132 6255572 ~ 6256279 (-)
G193922 NA other upstream 944900 6563340 ~ 6566039 (-)
G194100 NA other upstream 1812446 7494997 ~ 7498973 (-)

Expression


Co-expression Network