Gene
RNA
| Item | Value |
|---|---|
| gene id | G193330 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000043 |
| NCBI id | null |
| chromosome length | 7746009 |
| location | 6390215 ~ 6390911 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU219476 | True | 697 | lncRNA | 0.41 | 1 | 6390215 | 6390911 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000043_06379017_06386958 | KIAA0895L | coding | upstream | 1853 | 6379017 ~ 6388362 (+) |
| CI01000043_06368621_06375360 | NQO2, NQO1 | coding | upstream | 14693 | 6368621 ~ 6375522 (+) |
| CI01000043_06350003_06351456 | NA | coding | upstream | 38423 | 6348850 ~ 6351792 (+) |
| CI01000043_06336595_06341481 | KCNG4B | coding | upstream | 48656 | 6334671 ~ 6341559 (+) |
| CI01000043_06311971_06320679 | DPEP1 | coding | upstream | 69458 | 6311506 ~ 6320757 (+) |
| CI01000043_06440287_06445256 | SIRT3 | coding | downstream | 49376 | 6440287 ~ 6445405 (+) |
| CI01000043_06480540_06490898 | CDHR5A | coding | downstream | 87645 | 6478556 ~ 6490965 (+) |
| CI01000043_06504682_06515792 | NA | coding | downstream | 113771 | 6504682 ~ 6515794 (+) |
| CI01000043_06521172_06566044 | NA | coding | downstream | 130261 | 6521172 ~ 6566044 (+) |
| CI01000043_06751472_06754745 | SENP8 | coding | downstream | 360561 | 6751472 ~ 6755940 (+) |
| G193362 | NA | non-coding | upstream | 41377 | 6348627 ~ 6348838 (+) |
| G193356 | NA | non-coding | upstream | 46834 | 6343156 ~ 6343381 (+) |
| G193355 | NA | non-coding | upstream | 47282 | 6342644 ~ 6342933 (+) |
| G193350 | NA | non-coding | upstream | 64639 | 6325361 ~ 6325576 (+) |
| G193338 | NA | non-coding | upstream | 90979 | 6297234 ~ 6299236 (+) |
| G193383 | NA | non-coding | downstream | 24883 | 6415794 ~ 6415999 (+) |
| G193331 | NA | non-coding | downstream | 48332 | 6439243 ~ 6447340 (+) |
| G193393 | NA | non-coding | downstream | 62061 | 6452972 ~ 6453183 (+) |
| G193437 | NA | non-coding | downstream | 219307 | 6610218 ~ 6611265 (+) |
| G193453 | NA | non-coding | downstream | 270397 | 6661308 ~ 6667437 (+) |
| G193344 | NA | other | upstream | 79677 | 6310152 ~ 6310538 (+) |
| G193125 | NA | other | upstream | 179322 | 6205688 ~ 6210893 (+) |
| G192489 | NA | other | upstream | 837591 | 5467317 ~ 5552624 (+) |
| CI01000043_05169578_05171795 | CLEC3A | other | upstream | 1218485 | 5169578 ~ 5171848 (+) |
| CI01000043_05114193_05114497 | BOLA3 | other | upstream | 1271767 | 5114193 ~ 5114497 (+) |
| G193422 | NA | other | downstream | 253230 | 6644141 ~ 6648342 (+) |
| G193584 | NA | other | downstream | 541065 | 6931976 ~ 6934847 (+) |
| G193636 | NA | other | downstream | 1101026 | 7491937 ~ 7597959 (+) |
| G193650 | NA | other | downstream | 1124613 | 7544525 ~ 7544607 (+) |
| CI01000043_07667056_07673079 | NA | other | downstream | 1277644 | 7665689 ~ 7673725 (+) |
