G193393


Basic Information

Item Value
gene id G193393
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 6452972 ~ 6453183 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU219558
CGCCTGTAGTCTTAACAGTGTTCAAGCGCAGCCTTTCAGCCCAGACACAGCTGCCGCAAGGCGACAACACAGTCGGCTTGGTGTGTCAGGACCTTAAAAAACCCTCTACAATAGCATTACAGCAAGTTAAGAAACTTAGAAAGGTTCTCATGTGGCATCATGCTTTAAGATCCTTTTTGGAACCTTTATTTTTAAAAGTGCAGGGTGACCAT

Function

NR:

description
bile acid receptor-like isoform X5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU219558 True 212 lncRNA 0.45 1 6452972 6453183

Neighbor

gene id symbol gene type direction distance location
CI01000043_06440287_06445256 SIRT3 coding upstream 7567 6440287 ~ 6445405 (+)
CI01000043_06379017_06386958 KIAA0895L coding upstream 64610 6379017 ~ 6388362 (+)
CI01000043_06368621_06375360 NQO2, NQO1 coding upstream 77450 6368621 ~ 6375522 (+)
CI01000043_06350003_06351456 NA coding upstream 101180 6348850 ~ 6351792 (+)
CI01000043_06336595_06341481 KCNG4B coding upstream 111413 6334671 ~ 6341559 (+)
CI01000043_06480540_06490898 CDHR5A coding downstream 25373 6478556 ~ 6490965 (+)
CI01000043_06504682_06515792 NA coding downstream 51499 6504682 ~ 6515794 (+)
CI01000043_06521172_06566044 NA coding downstream 67989 6521172 ~ 6566044 (+)
CI01000043_06751472_06754745 SENP8 coding downstream 298289 6751472 ~ 6755940 (+)
CI01000043_06794188_06795136 NA coding downstream 340908 6794091 ~ 6795192 (+)
G193331 NA non-coding upstream 5632 6439243 ~ 6447340 (+)
G193383 NA non-coding upstream 36973 6415794 ~ 6415999 (+)
G193330 NA non-coding upstream 62061 6390215 ~ 6390911 (+)
G193362 NA non-coding upstream 104134 6348627 ~ 6348838 (+)
G193356 NA non-coding upstream 109591 6343156 ~ 6343381 (+)
G193437 NA non-coding downstream 157035 6610218 ~ 6611265 (+)
G193453 NA non-coding downstream 208125 6661308 ~ 6667437 (+)
G193476 NA non-coding downstream 223019 6676202 ~ 6695485 (+)
G193466 NA non-coding downstream 317252 6770435 ~ 6770811 (+)
G193574 NA non-coding downstream 434117 6887300 ~ 6888783 (+)
G193344 NA other upstream 142434 6310152 ~ 6310538 (+)
G193125 NA other upstream 242079 6205688 ~ 6210893 (+)
G192489 NA other upstream 900348 5467317 ~ 5552624 (+)
CI01000043_05169578_05171795 CLEC3A other upstream 1281242 5169578 ~ 5171848 (+)
CI01000043_05114193_05114497 BOLA3 other upstream 1334524 5114193 ~ 5114497 (+)
G193422 NA other downstream 190958 6644141 ~ 6648342 (+)
G193584 NA other downstream 478793 6931976 ~ 6934847 (+)
G193636 NA other downstream 1038754 7491937 ~ 7597959 (+)
G193650 NA other downstream 1062341 7544525 ~ 7544607 (+)
CI01000043_07667056_07673079 NA other downstream 1215372 7665689 ~ 7673725 (+)

Expression


Co-expression Network