CI01000046_00477221_00481241


Basic Information

Item Value
gene id CI01000046_00477221_00481241
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 477221 ~ 481243 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000046_00477221_00481241.mRNA
GAAACATTGGATTAAGAAATCAAGGGGCCACATGCTATCTGAACTCAGTGCTGCAGACACTTTTCATGACAGAAGATTTCAGAAATACTGTGGAAAGGTTGTTCAAACCAATTGATGTTCACATTGCACAATTATTTATGGATTTAAAGTCTGGAAAGAGAAGCGTTGCCACCACTGAGAGAATCACACCTGAACTTGAAATTAATGGTAAGGTATACCAGGGAGTGTTTGAGCACAAAACCATGTGTAAAAATCCAGGAAAAGAGCATCCTCTTGTGACGCGTCATGAACCTTTTTACATCATTCCCATCTGTATGGAAACGTATGGCACGGATTCTCCCATAAACATGCAAAGCTGTTTTGACTCGTATTTTGAACCCATCAAGACATGTGAGGAGGATCAAGTGAAATGCCCAACTTGCAAAGAGATGGTGAACACGGAAATAAAGTGTGATATACATAAACTTCCTCCAGTTCTGGTTGTGCAGCTGGAGAGATTTCAACTGGATTATTACACCATGAGGTACAAGAAGAACAAGTCTACGGTGGAAATTCAGTTCCAGTTATCAGTGAAAGATGACAGTGGAGCTCAACACCAGTATGATTTGTATGCTGTTGTGAAACATATTGGATCCTTCGTTGGTGGACATTATTATGCTGTCATCAAGTCATTTGAGGATCATCAGTGGTATGAGTTTAACGACAGCTCTGTACGCAAGAGGTCAAATCGAAAACTTTGGCTTGTGATGACCTTCTTGAGAATTGTGTGCTTACAACTTTCTCAAGTTTGTGGAGGCCTTTTTATGTTCAGGATAACACACAGTGAGGTTTATATAGAGTAAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000046_00477221_00481241.mRNA True 844 mRNA 0.40 7 477221 481243

Neighbor

gene id symbol gene type direction distance location
CI01000046_00436111_00443677 NUDT6 coding upstream 31723 436111 ~ 446757 (+)
CI01000046_00107578_00163060 NA coding upstream 314086 104109 ~ 163135 (+)
CI01000046_00100813_00103411 LERL1, LEPROTL1.L, LEPROTL1 coding upstream 373137 100568 ~ 104084 (+)
CI01000046_00492034_00493262 KIAA0141 coding downstream 10791 492034 ~ 493338 (+)
CI01000046_00494421_00496860 KIAA0141 coding downstream 13178 494421 ~ 496958 (+)
CI01000046_00499754_00526138 NA coding downstream 18511 499754 ~ 528550 (+)
CI01000046_00670755_00673139 NA coding downstream 189512 670755 ~ 673447 (+)
CI01000046_00770575_00774675 CDIP1 coding downstream 289332 770575 ~ 776269 (+)
G194727 NA non-coding upstream 9938 464614 ~ 467283 (+)
G194721 NA non-coding upstream 16876 458008 ~ 460345 (+)
G194750 NA non-coding upstream 51797 407504 ~ 425424 (+)
G194710 NA non-coding upstream 92181 384837 ~ 385040 (+)
G194762 NA non-coding downstream 5690 486933 ~ 487340 (+)
G194779 NA non-coding downstream 106882 588125 ~ 588490 (+)
G194780 NA non-coding downstream 108327 589570 ~ 619405 (+)
G194803 NA non-coding downstream 180744 661987 ~ 664124 (+)
G195003 NA other downstream 679914 1161157 ~ 1161690 (+)
CI01000046_01540075_01668012 HS3ST4 other downstream 1058251 1539494 ~ 1668012 (+)
CI01000046_01865451_01881353 NA other downstream 1391552 1865451 ~ 1881369 (+)
CI01000046_02451052_02454565 MAFK other downstream 1958674 2442395 ~ 2457280 (+)
G196936 NA other downstream 2705752 3186995 ~ 3194271 (+)

Expression


Co-expression Network