CI01000046_00670755_00673139



Basic Information


Item Value
gene id CI01000046_00670755_00673139
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 670755 ~ 673447 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000046_00670755_00673139.mRNA
ATGAAGCCGTCATGCTGGTGGTTGATGTCTGTTTATGTCACGTGTTTACACCCATCTCTCGTTCTGGCCATTAAAAGGATCATAGTGAATTACTCATCTCAGAACCTGTCCTCGGTTCCTCCCGGCCTGAAACCATCTACAGAGGACTTGGATCTGTCGCTGAACCACATCCAGACGCTGAGCGGCAAAGACTTCAGCACTACACCACGACTCCATTTCCTCAATCTGTCCTGGAATATACTGGAAAACATAGACATGGACACATTTAACTCCACACCGGCTTTGGAGATTTTGGACCTGTCGCACAACAGACTCCAGAACCTCTCTGACCAACCATACCTGCTTAAGGCGGGAAATCTGCAGTTCTTAGACTTGTCATCCAACATGTTTTCCGTCATGGCACTAGGGAAGGAATTTTCTACCCTGAAACACCTGCAGTGGCTTGGCCTGAGTGCCATTTCAATCGGCAACGAAGACTTTACTTACATTGCCAATCTTACTTTGAAAACGCTCTTCATTAATACTGATAAGCTACAGAAGTATGAAGAGAGGAGTCTAATGGGTGCCCATGCAGAGAAGGCCGTCATCGCCCTGTCCAACAAAGACCTAGATATTGCAATCGCTGATGATGTTTTTGCATCATTTAAAGAGGTAGAATTCACCAAGATGGACAGCGAGATGAAGGTTCTCCAGCAGATATGCCAGCGAGGAACAGTACGCACCATTAGTCTAGAAATCTCCAAGGTAAAAACCACCTGGGAAGTTCTGACAGGCTGTGTAAACACAATACTGTCATCTGCCATTCAACAGCTTTCCTTCTCAGACCTTACCATGACAAAAATGATAGACGGCAGGCCTGTGTCCTCGAGCCGCTTGTTGGAGTCCTTCTCTACAAGAAGAGCGTCTGTAACCGAATTCATCTTCAACCAAACAGAGCTCTATGACTTCTTCATAAGCATGCCAGCGAGAAAAGTTAGTTTAACCCAAACGCCCATCATCTTTATGACCTGCCCTCAGACTGTTAGCAAGATCGAGGTGTTGGACTTGTCCGATTGCGCCCTTACGGAAAACATCTTCTCGGTTGGTCCAGATACAGAATGTAGTACACTAACAAACCTGGAAAGTCTGGTTCTGAGGGGCAACAACCTGAAACATCTTGGACCGCTGACCTCCAGAATCCATCTCATGAGCTCACTGAAATACGCTGACTTCAGTCAGAACAAGCTTACTTATTCCGAGGAACAAGGCAAGTGCGTTTGGCCTCGCAAAGTTGCCCACGTGGATTTGTCCTCAAATGGGTTTGACCAGAGCATCTTCAAGTGTTTGCCCGATTCCATAAGAATCTTAAACCTCCGGAATAATCGAGTGACCACAGTCCCTGCAGATGTTGGGGTCTTAGAAGACTTGAGCATCCTGGACCTAGCAGATAACCGCTTGCTGGACCTTCCCACTTGTCAAGCATTCCCAAACCTGCAGAAGCTCCAAGTAAGAACAAACTCCATCCATTCGCCTTTACCGGGAACCCTCGAGACTTGTCCTTATCTCAAAGATCTCGACTTGAGCCGCAACCCCTTCATCTGCACTTGTGCTTTGCGAGAATTCGCAGCTCTCATCAAAAACCAAGCAACACAAACTCCTGGTGTGACTCTCGGCCACTGGCCGGAAGGATATCAATGTAGTTACCCAGAATCCAGGAGCAACACCATGCTAAAAGACTTCTACCTTCCTGAGATATCCTGTGATGGCTGGATCCTGGCTGTTACGATTCTGATCCCGACAATCACTCTGGTAGTTGCCATCAGCCTTCTTTGCCATCGGCTGGACGTGCCGTGGTATCTCAAGATGATGTGGAAATGGACACGCGCCAAGCACCACGCAATAACCTCCCAGAAGAAGACTGAGGATATGGAGGGGTTGCGCTTTCATGCGTTCATATCGTACAGCCAAAAGAACGCAGACTGGGTCAAAGCTCAATTTCTTCCCAAGCTCGAGGGCGATTGTGGGTTGCGAGTTTGTCACCACGAGCGGGACTTTATCCCGGGAAAGACGATCGTTCAGAACATCCTCCGATGCATCGAGCACAGCAGAAGGTGCGTCTTCGTGCTGTCGTCACATTTCGTCCAGAGCGAATGGTGCCATTACGAGCTCTACTTCGCCAATCACCAGAGGGTAATGCGAGGGATGGATAGCATCCTCCTTATTCTGCTGGAACCTCTGCCGTTATATCTCATTCCCTCCAAGTACTACCAACTCAAGGCCATGATGTCCAGACGCACATATCTAGAGTGGCCACAGGAAGGAGCCAAGCAGAAGCTGTTTTGGGCAAATCTCAGAGCAGCTCTGCAGGCCAACCTTCCCATTCCATCAGAGAGAGAAGAAGAGTGATGAGAGGAGTTTTACAAATTTATTTCATAGAGATTGTCTTAGCATATATTTATTTAGAGCAGTGGATCTCAACAAGGGTTCCAGGGTCCACTAGGGGGCCTCAACAAAACAAGATAAAACTAATCTAAAATCAAGATATTTCTAATTTTAATTCACCACCTCAACCTGGATACAAGAGGTAGCCTAATTTTAAAAGTGTGACTTCTAGTCCTGGAATATTGAGGGATTTAGCAAACTAAATAAAATAAATAAATAAATAAATAAATAAATACATAATGGAATTCTTAAATAAGCCATGTAATGTTGCA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000046_00670755_00673139.mRNA True 2693 mRNA 0.46 1 670755 673447

Neighbor


gene id symbol gene type direction distance location
CI01000046_00499754_00526138 NA coding upstream 143697 499754 ~ 528550 (+)
CI01000046_00494421_00496860 KIAA0141 coding upstream 173797 494421 ~ 496958 (+)
CI01000046_00492034_00493262 KIAA0141 coding upstream 177417 492034 ~ 493338 (+)
CI01000046_00477221_00481241 NA coding upstream 189512 477221 ~ 481243 (+)
CI01000046_00436111_00443677 NUDT6 coding upstream 225257 436111 ~ 446757 (+)
CI01000046_00770575_00774675 CDIP1 coding downstream 97128 770575 ~ 776269 (+)
CI01000046_00781088_00781355 CP033, SNRNP25 coding downstream 107641 781088 ~ 781355 (+)
CI01000046_00784993_00786387 NA coding downstream 111198 784645 ~ 787080 (+)
CI01000046_00893353_00931079 SHISA9B coding downstream 219852 893299 ~ 932443 (+)
CI01000046_01026787_01028640 IGFALS coding downstream 353055 1026502 ~ 1028869 (+)
G194803 NA non-coding upstream 6631 661987 ~ 664124 (+)
G194780 NA non-coding upstream 51350 589570 ~ 619405 (+)
G194779 NA non-coding upstream 82265 588125 ~ 588490 (+)
G194762 NA non-coding upstream 183415 486933 ~ 487340 (+)
G194809 NA non-coding downstream 3938 677385 ~ 677650 (+)
G194739 NA non-coding downstream 8256 681703 ~ 682678 (+)
G194810 NA non-coding downstream 10341 683788 ~ 684595 (+)
G194716 NA non-coding downstream 13557 687004 ~ 759690 (+)
G194734 NA non-coding downstream 49205 722652 ~ 743914 (+)
G194721 NA other upstream 210410 458008 ~ 460345 (+)
G195003 NA other downstream 487710 1161157 ~ 1161690 (+)
CI01000046_01540075_01668012 HS3ST4 other downstream 866047 1539494 ~ 1668012 (+)
CI01000046_01865451_01881353 NA other downstream 1199348 1865451 ~ 1881369 (+)
CI01000046_02451052_02454565 MAFK other downstream 1766470 2442395 ~ 2457280 (+)
G196936 NA other downstream 2513548 3186995 ~ 3194271 (+)

Expression



Co-expression Network