Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000046_01149090_01159654 |
| gene name | NA |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000046 |
| NCBI id | null |
| chromosome length | 7063170 |
| location | 1148936 ~ 1160102 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000046_01149090_01159654.mRNA | True | 992 | mRNA | 0.45 | 4 | 1148936 | 1160102 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000046_01067894_01070331 | H3F3AP4, H3F3C, H3F3B, H3F3A, GM6421 | coding | upstream | 78159 | 1066936 ~ 1070777 (+) |
| CI01000046_01026787_01028640 | IGFALS | coding | upstream | 120067 | 1026502 ~ 1028869 (+) |
| CI01000046_00893353_00931079 | SHISA9B | coding | upstream | 216493 | 893299 ~ 932443 (+) |
| CI01000046_00784993_00786387 | NA | coding | upstream | 361856 | 784645 ~ 787080 (+) |
| CI01000046_00781088_00781355 | CP033, SNRNP25 | coding | upstream | 367581 | 781088 ~ 781355 (+) |
| CI01000046_01246234_01251650 | NA | coding | downstream | 85630 | 1245732 ~ 1251689 (+) |
| CI01000046_01255895_01262232 | NA | coding | downstream | 95793 | 1255895 ~ 1262547 (+) |
| CI01000046_01275798_01283718 | PDPK1A | coding | downstream | 115696 | 1275798 ~ 1284100 (+) |
| CI01000046_01289846_01293954 | KCTD5A, KCTD5 | coding | downstream | 129466 | 1289568 ~ 1294336 (+) |
| CI01000046_01318513_01343464 | USP31 | coding | downstream | 156568 | 1316670 ~ 1344195 (+) |
| G195015 | NA | non-coding | upstream | 1381 | 1147007 ~ 1147555 (+) |
| G194991 | NA | non-coding | upstream | 58508 | 1090216 ~ 1090428 (+) |
| G194988 | NA | non-coding | upstream | 62140 | 1086531 ~ 1086796 (+) |
| G194987 | NA | non-coding | upstream | 62537 | 1086167 ~ 1086399 (+) |
| G194979 | NA | non-coding | upstream | 75272 | 1073385 ~ 1073664 (+) |
| G195038 | NA | non-coding | downstream | 46343 | 1206445 ~ 1208328 (+) |
| G195047 | NA | non-coding | downstream | 67383 | 1227485 ~ 1227867 (+) |
| G195048 | NA | non-coding | downstream | 68614 | 1228716 ~ 1228919 (+) |
| G195049 | NA | non-coding | downstream | 69126 | 1229228 ~ 1229433 (+) |
| G195535 | NA | non-coding | downstream | 224650 | 1384752 ~ 1384970 (+) |
| G194721 | NA | other | upstream | 688591 | 458008 ~ 460345 (+) |
| G195003 | NA | other | downstream | 1055 | 1161157 ~ 1161690 (+) |
| CI01000046_01540075_01668012 | HS3ST4 | other | downstream | 379392 | 1539494 ~ 1668012 (+) |
| CI01000046_01865451_01881353 | NA | other | downstream | 712693 | 1865451 ~ 1881369 (+) |
| CI01000046_02451052_02454565 | MAFK | other | downstream | 1279815 | 2442395 ~ 2457280 (+) |
| G196936 | NA | other | downstream | 2026893 | 3186995 ~ 3194271 (+) |
