CI01000046_01255895_01262232


Basic Information

Item Value
gene id CI01000046_01255895_01262232
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 1255895 ~ 1262547 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000046_01255895_01262232.mRNA
TGGAACTTAACGCCAGTTCACAGGGTAAAACATGCTTCTCAAATCTACACTTTCAGTCACAATGGATTTTACATGTACACGTATCATTTCTCTTGGACTAATGGATATGAAGATGAACACTATGGACCTTATCTACCCTTCACGTACACATTCCTGTACTACAAAGATGGAGATAATGACAGCGAGGTCAGTGTTCATCCAGAAAATAAAATGATTCAGATTGATGAAAAGGAGCTTGATCCGGGCACTACATACACTGCTATGTGTTGGGTTTTGGCAAAAAGTCCTTTACAAGACTTTCATGTTTTGGAAGACTTTTCAACAATCGACAAGATTTCCGAGGTCATGATGACTACACTACAGGATGAGGAAGAGAAAACGGGCATGTATCCCGCTGCACAATGCCATCAACCCTATGTGGGCCCCACAGCTGAGGTCTGGGTCCCACGCCAAATGCCCGATACGTGCAGTGAGACGAGTATCCCGTGTGAGGAATTTTCTTTGCTCTGTGAAGAGTTGCCAGATAAAGTGCATGACATCATGCAGTCTCTCGGTGTGGCGTGTCTGAGTGGGGATGTTCTGTCTCTGAAGGACTCTGCTCTTAGTCTTGAGAGTCTTGAGGACTGTGAGGAATCTGAAGCACCAGTTATCATTAACCCAGTGCCTGTGTGTTCCAAACAAGACTACTGCACTCTTACCAACACTCCCACAGGCCCTGTCTTCACCTTCACCAGAGATATAGAGCTGGACGAAAACACCTTTAGTGATTAAATGCATGAAGACACCTGCAGTAGACACGTGGACATTATGAACTGACATAAATCATTTATTCACATTTTGATTGTGTAAAATGTATGTTGTAGAACAAAATGTGAAGGTCTTTTCAAATAATGTTAACAAGGAATTCTTATTCTTCACTGAAACAAGTTGTCTAGGCTACAAGGTGTTAAAATAGCCATTATACTCCCTCCACTAATGCTGACAGTTCAAATGAGGTTTGACGATTCGTGTGCAGCGATTTGATTCTGTTTTTCATCAAGTAATATCATTATATTTCTATTTGTGATATTTGTACCTAGAAGAAAA

Function

NR:

description
hypothetical protein cypCar_00012209

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000046_01255895_01262232.mRNA True 1086 mRNA 0.41 3 1255895 1262547

Neighbor

gene id symbol gene type direction distance location
CI01000046_01246234_01251650 NA coding upstream 4206 1245732 ~ 1251689 (+)
CI01000046_01149090_01159654 NA coding upstream 95793 1148936 ~ 1160102 (+)
CI01000046_01067894_01070331 H3F3AP4, H3F3C, H3F3B, H3F3A, GM6421 coding upstream 185118 1066936 ~ 1070777 (+)
CI01000046_01026787_01028640 IGFALS coding upstream 227026 1026502 ~ 1028869 (+)
CI01000046_00893353_00931079 SHISA9B coding upstream 323452 893299 ~ 932443 (+)
CI01000046_01275798_01283718 PDPK1A coding downstream 13251 1275798 ~ 1284100 (+)
CI01000046_01289846_01293954 KCTD5A, KCTD5 coding downstream 27021 1289568 ~ 1294336 (+)
CI01000046_01318513_01343464 USP31 coding downstream 54123 1316670 ~ 1344195 (+)
CI01000046_01540075_01668012 HS3ST4 coding downstream 277528 1539494 ~ 1668012 (+)
CI01000046_01865451_01881353 NA coding downstream 602904 1865451 ~ 1881369 (+)
G195049 NA non-coding upstream 26462 1229228 ~ 1229433 (+)
G195048 NA non-coding upstream 26976 1228716 ~ 1228919 (+)
G195047 NA non-coding upstream 28028 1227485 ~ 1227867 (+)
G195038 NA non-coding upstream 47567 1206445 ~ 1208328 (+)
G195018 NA non-coding upstream 98563 1157127 ~ 1157332 (+)
G195535 NA non-coding downstream 122205 1384752 ~ 1384970 (+)
G195564 NA non-coding downstream 134216 1396763 ~ 1397086 (+)
G195909 NA non-coding downstream 481253 1743800 ~ 1744017 (+)
G196035 NA non-coding downstream 603957 1866504 ~ 1866807 (+)
G196038 NA non-coding downstream 608151 1870698 ~ 1870980 (+)
G195003 NA other upstream 94205 1161157 ~ 1161690 (+)
G194721 NA other upstream 795550 458008 ~ 460345 (+)
CI01000046_02451052_02454565 MAFK other downstream 1177370 2442395 ~ 2457280 (+)
G196936 NA other downstream 1924448 3186995 ~ 3194271 (+)
CI01000046_03943890_03945302 ATP5J2 other downstream 2681281 3943794 ~ 3945500 (+)

Expression


Co-expression Network