CI01000046_01865451_01881353


Basic Information

Item Value
gene id CI01000046_01865451_01881353
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 1865451 ~ 1881369 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000046_01865451_01881353.mRNA
TAAAGATTTTGAGCCAACCACACCACTGCAGGAGGCTGAACTCTGGCCTGCCCTGCTGGATGAGGCTGAAGCAGAGGAGGGTGAAGTGCTGAAGTGTGCTTGGGAAAACAGCCAGCAGGTGATAAAGCTGCTTAATGGCCATGGGAGAAATCATGTCTTTAACAGAACAAAAAAGCACAATGAAACGTTCACATGCAAATGCGCAAAAGAACCCACAGAGAAGGACTTGAAGTGTTTCAATGACTATGAGACAGAAATGAAGTGCAGTTTTGAGTCTGACGGCCTCATAAGTTGCTCTGGATACAAACTCAATATCACACGTAATGAAGCAGATGTGTTAAAAGAATATACATGCATCTTTGAGAGAAGTCATCACAGTCCCAGTTGTGAATGTAAAATTGAAGTCCAAGGGTTTTCTACTTCTGAGATATTCACTACTACACTTCTGGAAGGAACAAACATTTTATTAAATGAAAACTTCACAACACATGATTTCATCAAACCGAAAACTCCAGTTTTATCAGTGCAGAAGACTGAAAATGGAAATTTTAATGTAACTTGGGATGACAAGTACACAAGTTATTCTACAGGACATTTTGTAGAGAGTTTGGAAATACATCTGAGCTATAGGATTAAAGGAGAAGATGAAACATTCTCCAAAAAGGTGTCAAATTCAGTGGGATTCTTTGAGATTGTGGGCACAATTCTCCAGCCAAACACCGACTACATTCTGACAGCAAGAATGAGCACAAACTATAATGAACACAAGATACTGAGTGACCAGAGCGCACCAGTTGAGTTCACCAGCCCATCTTTAGGGATAGGTATTGTGTTGACATGCAAACTTGCGGTTGTATTACAACACCAATGTCAAGTTACAAAAAAAGCCACGAAGTTGCATGACATCCTCAATGCGACATGCTACATCAAATCAATTGTGCGTTTGTCCAAGCATTCAAACACCGACATCGTAGTCTGACTGAGACAGATTTACA

Function

NR:

description
IL-4RA-like protein 1 membrane anchored form

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000046_01865451_01881353.mRNA False 995 mRNA 0.41 7 1865451 1881369

Neighbor

gene id symbol gene type direction distance location
CI01000046_01540075_01668012 HS3ST4 coding upstream 197439 1539494 ~ 1668012 (+)
CI01000046_01318513_01343464 USP31 coding upstream 521256 1316670 ~ 1344195 (+)
CI01000046_01289846_01293954 KCTD5A, KCTD5 coding upstream 571115 1289568 ~ 1294336 (+)
CI01000046_01275798_01283718 PDPK1A coding upstream 581351 1275798 ~ 1284100 (+)
CI01000046_01255895_01262232 NA coding upstream 602904 1255895 ~ 1262547 (+)
CI01000046_01903950_01922429 KDM8 coding downstream 20721 1902090 ~ 1922439 (+)
CI01000046_01933932_01935589 NA coding downstream 51521 1932890 ~ 1937822 (+)
CI01000046_01963803_01965901 NA coding downstream 82186 1963555 ~ 1968371 (+)
CI01000046_01988070_01995034 UBFD1 coding downstream 104951 1986320 ~ 1995330 (+)
CI01000046_02006028_02024639 NA coding downstream 124659 2006028 ~ 2024940 (+)
G195909 NA non-coding upstream 121434 1743800 ~ 1744017 (+)
G195564 NA non-coding upstream 468365 1396763 ~ 1397086 (+)
G195535 NA non-coding upstream 480481 1384752 ~ 1384970 (+)
G195049 NA non-coding upstream 636018 1229228 ~ 1229433 (+)
G195048 NA non-coding upstream 636532 1228716 ~ 1228919 (+)
CI01000046_01865451_01881353 NA non-coding downstream 6708 1865451 ~ 1881369 (+)
G196050 NA non-coding downstream 79850 1961219 ~ 1961759 (+)
G196051 NA non-coding downstream 80877 1962246 ~ 1962532 (+)
G195978 NA non-coding downstream 115754 1997123 ~ 1999094 (+)
G195003 NA other upstream 703761 1161157 ~ 1161690 (+)
G194721 NA other upstream 1405106 458008 ~ 460345 (+)
CI01000046_02451052_02454565 MAFK other downstream 558548 2442395 ~ 2457280 (+)
G196936 NA other downstream 1305626 3186995 ~ 3194271 (+)
CI01000046_03943890_03945302 ATP5J2 other downstream 2062459 3943794 ~ 3945500 (+)
G197055 NA other downstream 2268054 4149423 ~ 4149780 (+)
G197121 NA other downstream 2489642 4371011 ~ 4371430 (+)
CI01000046_02027256_02031337 RMI2 coding downstream 68006 2027154 ~ 2031451 (+)
CI01000046_02037519_02037782 SNN, CP075, SNN.S, SNN.L coding downstream 78371 2037421 ~ 2039716 (+)
G196038 NA non-coding upstream 17097 1870698 ~ 1870980 (+)
G196035 NA non-coding upstream 21270 1866504 ~ 1866807 (+)

Expression


Co-expression Network