CI01000046_01933932_01935589


Basic Information

Item Value
gene id CI01000046_01933932_01935589
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 1932890 ~ 1937822 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000046_01933932_01935589.mRNA
AGATAAAAGGCAAAGCACAAATATGTTTTGTCATCATAAAGTTAAATCCATTAGCTATAAAGCACCTGGTTGGAAGGCCCACTTTATTAAGTGATTATATCAAAACCCATATGTAAGGCATTCCCAGCAAACACAACTAGGCTACGTTTCTTTTGTGTTTGCTGTGATATTGCTTGAATGCCATGTTGTATTGATAATCTCGTGCCTAACAAAGTAACTCTATTCACATAGTATGGCCTTCGTATATTATTGCAAAATAATTCCATACCGTTTCCAACCACAAGGCGTCACTTGGAGAGAGGGGGCTGGCAGCGTTGGAAGTTGAAGTTACCTTTTTTTCCTGTAATCATTTACATACATTTAAAAAAAAAAAAATCATAAGCTGTTTTATGTTTTTAAACATTTAAAAAACAAACCCATGTCTGCCCGAAACTGTGTTACAAAGATGTAAAAATAAATTATATAATCACTTTATTTTCTGACTGAGTTATTAACAGTCAATTTCGACATTTTGAAACTGAAATGAGACTTGGTACAGGAACGGGAACTTGCGTATTTCTCTGTAATGCAGTCTCATTTGAGCTTCCTTTTTGTGAGCCTTGCATAATAATTTCCTTTGTGTTTGACTACCTCATAAATACCACATTATAACGAAGACTAATCTTGTTTATATCTGATCAGTGTTCTGTTTGTTTTCCGTGGAATTCATTTGGTGTGCTTTCCTGCTTCTACTAAATACTGAGCAAATGGTCTGAATACTTAGGACCATGTGATATTTCAGTTTTTCTTTTTAAATAAATCTGCAAAAATGTCAACAATTCTGTGTTTTTCTGTCAATATGGGGTGCTGTGTGTACATTAATGAGGAAAAAAAATGAACTTAAATGATTTTAGCAAATGGCTGCAATATAACAAAGAGTGAAAAATTTAAGGGGGTCTGAATACTTTCCGTACCCACTGTATAGATGATATGAAATATATTCAAAGATATTCACATATTGATGAATTGTAAAAATAAATAATAATAAAAATTGTCCATACAGATGTCCAAAAAGGTGTCAAAGTTGTCAAATTCAGTGGGATTCTTTGAGATTGTGGGCACAATTCTCCAGCCAAACACCGACTACATTCTGACAGCAAGAATGAGCACAAACTATAACGAACACAAGATACTGAGTGACCAGAGCGCACCAGTTGAGTTCACCAGCCCCTCATCTCCAAATGATATAGTCAGAACGGTGGTTCCACCTCTGTGTGTTGGTTTAGTCCTCATCATTTCTGCTATCTTCATCTGCGTTTTGAGGATGAAGAAAAAATGGTGGGACAAGATCTCCAAGCCAAAAGGTCATATTTTGCCTCCTTCCATTATGAACTTCTCCACAATCCATGTAGAGATTCCAAAACTGGAATTTCAGGAGGAAAAGAAATTGATCTCAGCGTCATCAGTAGATACAACCAACGAGAAAAGTTCCCACAGTGTTGAGTCGGCGGCAGACGATTACAGCCAGGCCGGCTTTGATTCTGGTAGTGACAAGGAGAATTGCAGTTCGATCAACGTCTTATCACACGTCAAACATGCCCTGGATGAGGATTTAAAATCTTTTCTTTTTACCAGCAACACACCCAGCAATCAGGGCACTACGATGGTAGTCAAGAGTGTTGGTATCAGTTCCTCAAGAGAAAACAACCGTGCAAACCGAGATTCGGGCAACTGCACTGGCTCATCGGTTTTTAGCAACATGACATATTTGGAATCGGCCACTTACGATTCTTCATTCCTGGAGCAGCCGAGTTGGGATCATTCCTGTCAGTCCGACAAGAATGAGGTTTTTAGCTGTGAAAACTCAGCTATGAGCGCTGATATCAGCAAGAGCCAGTTTAACTTTCCCACTATTGATTCTTTGGAAGATGGATATCAGTGCTTCAACAGTGTTGTGAACCAGGGAAATGATGCAGATGTTTGTTTGAACCGTTCAGATGATGTTGATTCTGATGAAAATTTCATTGGGAATAATATCATCACTTGTAAAAATCCACCTAATCCTTCTCTGTTGCTCCATGATGGCAGCGTCACACCAAGTGATGATGGATATCAAGCTTTTGAAGGCTTAACAAAGAGCACAGAAGGACAGTGGAGCACGAGCACCAGAACCGAACAAGCTCTTAATGAATGTGGAGCGCTGAAATTCCCCCACAGCACTGGCCAAGATCCCACATCAAAAAGTTTGTGGGCCTCTTCTTTGCATTTCTCACCCATTATTCATATAGACACTTCCTATCAGTCTGTTTAGCTGTGCTGTACACAACTGAAACATTGAATTATCTTTGTATGTAATTTGTTGTTGTTCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTTATTATTGTACAGAATTTCACACACAATGCCAAATGTGACCCTGAGTCACATTTGCAAATGCAAATTTTAAAGGCATGATAACAAGGCTAAGACGGTTCTTTTCATTCTGTGCCATTAAAACAAATGATAGGTATTTGCTTATTCATCTGTACAGTTACA

Function

NR:

description
IL-4RA-like protein 1 membrane anchored form

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000046_01933932_01935589.mRNA True 4523 mRNA 0.21 5 1932890 1937822

Neighbor

gene id symbol gene type direction distance location
CI01000046_01903950_01922429 KDM8 coding upstream 10451 1902090 ~ 1922439 (+)
CI01000046_01865451_01881353 NA coding upstream 51521 1865451 ~ 1881369 (+)
CI01000046_01540075_01668012 HS3ST4 coding upstream 264878 1539494 ~ 1668012 (+)
CI01000046_01318513_01343464 USP31 coding upstream 588695 1316670 ~ 1344195 (+)
CI01000046_01289846_01293954 KCTD5A, KCTD5 coding upstream 638554 1289568 ~ 1294336 (+)
CI01000046_01963803_01965901 NA coding downstream 25733 1963555 ~ 1968371 (+)
CI01000046_01988070_01995034 UBFD1 coding downstream 48498 1986320 ~ 1995330 (+)
CI01000046_02006028_02024639 NA coding downstream 68206 2006028 ~ 2024940 (+)
CI01000046_02027256_02031337 RMI2 coding downstream 89332 2027154 ~ 2031451 (+)
CI01000046_02037519_02037782 SNN, CP075, SNN.S, SNN.L coding downstream 99697 2037421 ~ 2039716 (+)
G196038 NA non-coding upstream 61910 1870698 ~ 1870980 (+)
G196035 NA non-coding upstream 66083 1866504 ~ 1866807 (+)
G195909 NA non-coding upstream 188873 1743800 ~ 1744017 (+)
G195564 NA non-coding upstream 535804 1396763 ~ 1397086 (+)
G195535 NA non-coding upstream 547920 1384752 ~ 1384970 (+)
G196050 NA non-coding downstream 23397 1961219 ~ 1961759 (+)
G196051 NA non-coding downstream 24424 1962246 ~ 1962532 (+)
G195978 NA non-coding downstream 59301 1997123 ~ 1999094 (+)
G195003 NA other upstream 771200 1161157 ~ 1161690 (+)
G194721 NA other upstream 1472545 458008 ~ 460345 (+)
CI01000046_02451052_02454565 MAFK other downstream 502095 2442395 ~ 2457280 (+)
G196936 NA other downstream 1249173 3186995 ~ 3194271 (+)
CI01000046_03943890_03945302 ATP5J2 other downstream 2006006 3943794 ~ 3945500 (+)
G197055 NA other downstream 2211601 4149423 ~ 4149780 (+)
G197121 NA other downstream 2433189 4371011 ~ 4371430 (+)

Expression


Co-expression Network