CI01000046_02066859_02072868


Basic Information

Item Value
gene id CI01000046_02066859_02072868
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 2066859 ~ 2073014 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000046_02066859_02072868.mRNA
ATGACTGCGCTGTATCACACATTCCTGCTCTTTACAGTCAGTATGGCTTCCCTGCAGCCACAGAGGTCTTCAAGGAGTAAAAGGGGTCTGCTGGAACTAGCTGGGGTTATCAAGTGCAGCACGGGACGAACAGCTTTATCTTATGTGATGTACGGATGTTACTGCGGTCTCGGGGGTCAAGGGTGGCCCAGAGACAGAGCGGACTGGTGTTGTCACAAGCATGACTGCTGTTATGGGGATGCAGAATTCGCGGGCTGTCAAACAAAAACGGACCAGTATCAGTGGACGTGCGACGATGAGCAGGCTGACTGTGACGCGCTTAATGACAGATGTGCGAAAATCCTCTGCCGATGTGACAGGGAAGCAGCCAGATGTCTCAGAAAGGCACCGTTCAACCAAAAGTACGCTCTGTGGCCGGATTTCCTCTGTGGATGTGTTCATCCTACCTGCAACATTTACTAATGAAATTTTGTCCTTTGGTAATCAAATCTTGTTTGATTACCAGAGCTTGTATTGTATGTTTAGTTTGAATTTATATTGTTTAAAGGATTTCCATTTTCTTATGTATTTTACATTTGCATAGTTGACTTTCATAAGTGAATGAGTTA

Function

NR:

description
Zgc:92162

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K01047 PLA2G, SPLA2; secretory phospholipase A2

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000046_02066859_02072868.mRNA True 608 mRNA 0.45 4 2066859 2073014

Neighbor

gene id symbol gene type direction distance location
CI01000046_02037519_02037782 SNN, CP075, SNN.S, SNN.L coding upstream 27804 2037421 ~ 2039716 (+)
CI01000046_02027256_02031337 RMI2 coding upstream 35408 2027154 ~ 2031451 (+)
CI01000046_02006028_02024639 NA coding upstream 41919 2006028 ~ 2024940 (+)
CI01000046_01988070_01995034 UBFD1 coding upstream 71529 1986320 ~ 1995330 (+)
CI01000046_01963803_01965901 NA coding upstream 99807 1963555 ~ 1968371 (+)
CI01000046_02123765_02158243 AXIN1 coding downstream 50751 2123765 ~ 2158243 (+)
CI01000046_02264732_02268319 UNCX coding downstream 191558 2264572 ~ 2268638 (+)
CI01000046_02335530_02348525 NA coding downstream 260960 2333974 ~ 2348945 (+)
CI01000046_02356713_02359204 NA coding downstream 283640 2356654 ~ 2360009 (+)
CI01000046_02365658_02365816 NA coding downstream 292644 2365658 ~ 2366186 (+)
G195981 NA non-coding upstream 9843 2056070 ~ 2057016 (+)
G195978 NA non-coding upstream 67765 1997123 ~ 1999094 (+)
G196051 NA non-coding upstream 104327 1962246 ~ 1962532 (+)
G196076 NA non-coding downstream 5108 2078122 ~ 2078480 (+)
G196080 NA non-coding downstream 9671 2082685 ~ 2083646 (+)
G196085 NA non-coding downstream 13795 2086809 ~ 2087131 (+)
G196086 NA non-coding downstream 14265 2087279 ~ 2087514 (+)
G196087 NA non-coding downstream 15710 2088724 ~ 2089219 (+)
CI01000046_01865451_01881353 NA other upstream 107711 1865451 ~ 1881369 (+)
CI01000046_01540075_01668012 HS3ST4 other upstream 503522 1539494 ~ 1668012 (+)
G195003 NA other upstream 905169 1161157 ~ 1161690 (+)
G194721 NA other upstream 1606514 458008 ~ 460345 (+)
CI01000046_02451052_02454565 MAFK other downstream 366903 2442395 ~ 2457280 (+)
G196936 NA other downstream 1113981 3186995 ~ 3194271 (+)
CI01000046_03943890_03945302 ATP5J2 other downstream 1870814 3943794 ~ 3945500 (+)
G197055 NA other downstream 2076409 4149423 ~ 4149780 (+)
G197121 NA other downstream 2297997 4371011 ~ 4371430 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_026699 zgc:92162 coding NC_007114.7 CM002887.2 43757181 ~ 43770876 (-)