CI01000046_02335530_02348525


Basic Information

Item Value
gene id CI01000046_02335530_02348525
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 2333974 ~ 2348945 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000046_02335530_02348525.mRNA
CTTTAAAAGCAAATGGTGTGGAAGCAAAACAAGCATGTGCCCGTCCTGAAGCGCAGCTCCTGAGGTGTTAACTAATCTCCAGTGACCAGTCTGTGTGCTGCCTTCACTAATTGCTCCCTGTATTTCAGTCTGGTGTGAGAGCAACCATTGTAGCGAGCGCCCGGCTGGCCCCCAGAGGTCTCACACCTTCATTATCACTCTTTATTGCAAAACCTTCCATGGGCACTCAGCACCAAACAGCCTGTGCGATAAAAATAGAGCCTTTCCCCTCCTCTCCTTTTGGTGGTTTCAGTTTTAATTACCAACACAGCGCCCGAGCCCGAGTCCTCAGCAGGCTGGGCTTTTTGTTCACTAATTAAAGCGAGGAGGGAGTTTATTGAAGGGACCCCAACTATGTGCTCTCATCTATTATTAAGAGGGCAGGACAAATCATTTTCAAATTTAAACGCTGAAACCTGTCCAGGGACGCACTGGGGTTCGGGGAGGGGGAGGAGAGACGTGTCGAACGAGCAAGCGAACGGACGGACTGAAACAGAGAAGAAAGCCGGCTTTTGTCTTGCTGAGGGTGCGCGTTGGCACCCATCACGCATTATGACGCTCCTGTCAGGTACAGTCTGGCAGAGACTCCGTTCCCACCCTCTCGGAGCCTGCCATCTGTCTGCTACGTCACCTCATTGACGCTTTCTGGGTCAAACCGCGTAGCATCGCTGCTAAACTCACTAGCGACCATCCACAGCTTGGATCCCACCCTGATTTAATTGCTGTACCCCCTATGTGTGTTTTGGCTAAACAGAGGACATAAATAAGCAAACAGCAGGCAGGTAATAAGAGGGTGGGATGGAAGATGAGATTGATGTGGGGAACTTCCTCTCTTTGACCCGTTTTGCTACAGCATTTGCTCCCGGTACTGGCCAATCGGGCTCGACCTTGACAGCTGCATAGTTAAAGGGTTAGTTCACCCAAAAATGAAATTTGTCATTAATTACTCATCCTCATGTTATTCCAAAACCGTAAAACCTTCGTTCATCTTCGGAACACAAATTAAGATATTTTTGATGAAATCCAAGAGTTTTTTTTTTTTTTATCCCCCATAGAAAGCAACGTAATTACCACATTCAGTGTGCAGAAAAGAAGTAAAGACATGGTTAAAATAGTCAACGTGACTACAGTGGTTCAACCTTAATGTTATGAAGCGATGAGAATACTTTTTGTGCGCAAAAACAAAACAAAAATAATGCCTTTATTTAACAATTTCTTCTCTCCCTGTTTTTGCGCACAAAGTTTTCTCGTCGCTTCATAACATTAAGGTTGAACCACTGCAGTCACATTGACTACTGGACCTTGAATGTGGTAATGCTGCTTTCTATGGGGGATTAAAAAAAAAAAACATTCTCGGATTTCATCAAAAATATCTTAATTTATGTTCTGAAAATGAACAAAGGTCTTACGGGTGTGGAACGACATGAGGGTGAGTAATTAATGACAGAAATTAAATTTTTGGATGAACTAACCCTTTAACTCAGTTTAAAATAATAGTCTGCAAATGACCAAACCACATGAACATCTTGAAAACGTATCGTTCAAGTGGACATGTGGTGTTCACAATTATAATAGAATCACGAAAAAAGCAAGCCGTCATGTACACTATTGGATATTTTTCCAAACCCAACCAGAAACTTGGGTTCATCGTAATGGAGCTGGTTGGCTTATTCAAATTAGGCTGGTTTGGTTGCTCCCTGTGTTTGTCATACACACAGAGCCTTTCCCAGAGATCTTCTCTTTCATCGCTGCTTGTTTGTCCGTTCTTTATTCCCGATGCCCCCAGTGCTAATGTCAAAACAACAGTTGATGTTATTTCTCCAGGGGGACGTGGGTGTGAGCGCCATCCTTCAGCAGGTGTAGGCCACTGCAGAGCATATGCCATCAGGCTGCGAGGAGCACTCTGTGGAGACGTTCCTCCGGCGTTTCCTGGGGCCTTGCTCGACTGGGAACGGGCATCACTCACAAACACCATCTGTCAGCTAGATGGAGAGGGAGATGAGGAAGAACATGCCTCGTTCTTCAGCAGGCTTCTCAGGTTTCCTCGACCACACCGGAGCAACTGGAGACAAAGAAGAGCGGAGAGCTCCCGCGATGCTCTGGGACAGATTTCCCCCTCTTGCGAAGAGACACCTGAAGTGTTTGACGCTAAATTAGGTTTTCAAAGGCAATAATTAGACTTTCTTCCCTAAAGGTAAATTACCTGCTTCCCAATTGATCTGCATTCTAATTATAACAATTTGCCCAGGAGCCATTGCTATAGAACCGCACCGTCTACTACGAGTAGATGTTAAACATACGAAAAGACGTGTAGATATGTGCGAACTGCTGTAATCAGTTTAATAAGCATTCTGCACCATAACTGGAAGAAATTAATCAACAGTTCTGTGCACCTTTGAGGGTGATAAATTAAATGATTATTAGTGAATATTAGGAGAGCAGAGGACAAGGTCTTTCTCCCCATATGCTGCTGTGAGGTTTCACGATCACAATATAGTCAGTCTTAATGGCAAAATCTGCATTTATTCGCAAGCCACTAACTGCATGAAACCTTGATGAATCATTGTGAGTAGGAGCTCTGAAATCAATAATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000046_02335530_02348525.mRNA True 2633 mRNA 0.44 4 2333974 2348945

Neighbor

gene id symbol gene type direction distance location
CI01000046_02264732_02268319 UNCX coding upstream 65336 2264572 ~ 2268638 (+)
CI01000046_02123765_02158243 AXIN1 coding upstream 175731 2123765 ~ 2158243 (+)
CI01000046_02066859_02072868 NA coding upstream 260960 2066859 ~ 2073014 (+)
CI01000046_02037519_02037782 SNN, CP075, SNN.S, SNN.L coding upstream 294919 2037421 ~ 2039716 (+)
CI01000046_02027256_02031337 RMI2 coding upstream 302523 2027154 ~ 2031451 (+)
CI01000046_02356713_02359204 NA coding downstream 7709 2356654 ~ 2360009 (+)
CI01000046_02365658_02365816 NA coding downstream 16713 2365658 ~ 2366186 (+)
CI01000046_02451052_02454565 MAFK coding downstream 102107 2442395 ~ 2457280 (+)
CI01000046_02616123_02661535 NA coding downstream 267102 2616047 ~ 2661964 (+)
CI01000046_02674254_02676647 ELFN1, ELFN1A coding downstream 325115 2674060 ~ 2676801 (+)
G196177 NA non-coding upstream 31896 2301855 ~ 2302078 (+)
G196176 NA non-coding upstream 32178 2301426 ~ 2301796 (+)
G196164 NA non-coding upstream 50208 2283538 ~ 2283766 (+)
G196156 NA non-coding upstream 69912 2263831 ~ 2264062 (+)
G196155 NA non-coding upstream 70599 2263141 ~ 2263375 (+)
G196209 NA non-coding downstream 36805 2385750 ~ 2386244 (+)
G196107 NA non-coding downstream 88905 2437850 ~ 2481044 (+)
G196122 NA non-coding downstream 289053 2637998 ~ 2689802 (+)
G196123 NA non-coding downstream 300343 2649288 ~ 2749966 (+)
CI01000046_01865451_01881353 NA other upstream 374826 1865451 ~ 1881369 (+)
CI01000046_01540075_01668012 HS3ST4 other upstream 770637 1539494 ~ 1668012 (+)
G195003 NA other upstream 1172284 1161157 ~ 1161690 (+)
G194721 NA other upstream 1873629 458008 ~ 460345 (+)
G196936 NA other downstream 838050 3186995 ~ 3194271 (+)
CI01000046_03943890_03945302 ATP5J2 other downstream 1594883 3943794 ~ 3945500 (+)
G197055 NA other downstream 1800478 4149423 ~ 4149780 (+)
G197121 NA other downstream 2022066 4371011 ~ 4371430 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location