CI01000046_02356713_02359204


Basic Information

Item Value
gene id CI01000046_02356713_02359204
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 2356654 ~ 2360009 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000046_02356713_02359204.mRNA
CTATAAAGAGGTTAAGCTCTTTTGTAATTAGCACACACTCTAATACATACCACGATTTAATGGCCTTAGTGAACAAGACAGGCTGCTTGGCCTCTTCAGCAAGGCTTTGTACCAAAAAGACCTGCTTGTTATTGACAGCTGCTGCACGTTTGCTTGAAACAATTATGGCGCGTATCGGTGAAAGTGATCCCACACAATCAATTAGCCAACGTACTTCGCCTAAAATCCAGAAAATGAAGGAGTGGGTTGTCAATGCCAGAAAAACAGCACCCGGCTCCGCCGCCACTGGCTGGCGAAGAGTAATTCACCAAAATTGCCACTTAGAGCCGCTCCAAGATGTGCGTTTCATCTCCAAGCTTCCTCTGGTCTCTGCTAGTCAGTTCATTTTTACTTCCTCCAAGAGTGCTAGCACTTCATTAACCTTGCCAGGCTCAAGATAAGAGAGGTAGAGCATCAAACGAAGCCAGCCAACAGAGAGAAAAGACAGCGCAGTCTCCACCGCACAGCGGCCATCAAACAGACATAAGCACGGCCACACACACAGTGTCCCATGCAAAAAACACTCAATGAGCTCTCTTTAGCATATCAGGGCTGCTTCTGAGTCTGTCATTATAAGCACCAGAAGGGAGTTAACCCCAGAATCCATAAAGTGGTTGTGATTAAGGCATGATATTAAAGAATTCAAATTTTTGTTTTATTGATAAAATATGTATACAACTTTTATGTAATCCTTGGCATTGACAATCCAAAAGAGGAAACGAACAAACAAAAAACAAAGCAAAAAAAAAAAAAAAAAAAAACACAGGCAAAAGTCAATGTTACAGGTTCTGAAACATTAAAAATGGAGGCCTATGTAAAACCACTAGTATTTGACAAACTATCAATTTTATGCAGGACTCTTAATTATTAATTTTTCAGGATTCAAAAGACCTTTTGATCTGAAAGCTAAATGCTTAATTAGTTTTGAAGACAAATATAATTGTCTGTGAACTGGAGAAATACAGAAAGAAAAGCAGCTACCAGGTGCCCAGTATGTGTGGAAACCCATATGCTGGAAAAGTCACCATGAAGTTCAGGGAATGACTTCAGTGGGCCCACAGGTTTACATTAAATATGCGTCAAGTTTATAATAATTAAGAGGAATAACTCAAGACCACACAAAACTGAGTCAAATGTGAGTTCATGATCAACATCTGTGGGGAAAAAAAAAAAAAAAAAAAAACATATACAATTTAAGTTTGAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000046_02356713_02359204.mRNA True 1245 mRNA 0.39 4 2356654 2360009

Neighbor

gene id symbol gene type direction distance location
CI01000046_02335530_02348525 NA coding upstream 7709 2333974 ~ 2348945 (+)
CI01000046_02264732_02268319 UNCX coding upstream 88016 2264572 ~ 2268638 (+)
CI01000046_02123765_02158243 AXIN1 coding upstream 198411 2123765 ~ 2158243 (+)
CI01000046_02066859_02072868 NA coding upstream 283640 2066859 ~ 2073014 (+)
CI01000046_02037519_02037782 SNN, CP075, SNN.S, SNN.L coding upstream 317599 2037421 ~ 2039716 (+)
CI01000046_02365658_02365816 NA coding downstream 5649 2365658 ~ 2366186 (+)
CI01000046_02451052_02454565 MAFK coding downstream 91043 2442395 ~ 2457280 (+)
CI01000046_02616123_02661535 NA coding downstream 256038 2616047 ~ 2661964 (+)
CI01000046_02674254_02676647 ELFN1, ELFN1A coding downstream 314051 2674060 ~ 2676801 (+)
CI01000046_02794245_02796188 NA coding downstream 433870 2793879 ~ 2797088 (+)
G196177 NA non-coding upstream 54576 2301855 ~ 2302078 (+)
G196176 NA non-coding upstream 54858 2301426 ~ 2301796 (+)
G196164 NA non-coding upstream 72888 2283538 ~ 2283766 (+)
G196156 NA non-coding upstream 92592 2263831 ~ 2264062 (+)
G196155 NA non-coding upstream 93279 2263141 ~ 2263375 (+)
G196209 NA non-coding downstream 25741 2385750 ~ 2386244 (+)
G196107 NA non-coding downstream 77841 2437850 ~ 2481044 (+)
G196122 NA non-coding downstream 277989 2637998 ~ 2689802 (+)
G196123 NA non-coding downstream 289279 2649288 ~ 2749966 (+)
CI01000046_01865451_01881353 NA other upstream 397506 1865451 ~ 1881369 (+)
CI01000046_01540075_01668012 HS3ST4 other upstream 793317 1539494 ~ 1668012 (+)
G195003 NA other upstream 1194964 1161157 ~ 1161690 (+)
G194721 NA other upstream 1896309 458008 ~ 460345 (+)
G196936 NA other downstream 826986 3186995 ~ 3194271 (+)
CI01000046_03943890_03945302 ATP5J2 other downstream 1583819 3943794 ~ 3945500 (+)
G197055 NA other downstream 1789414 4149423 ~ 4149780 (+)
G197121 NA other downstream 2011002 4371011 ~ 4371430 (+)

Expression


Co-expression Network