CI01000046_02365658_02365816


Basic Information

Item Value
gene id CI01000046_02365658_02365816
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 2365658 ~ 2366186 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000046_02365658_02365816.mRNA
GAGTGCGAGCATTTGCAGGAGATGGGGCGCAAAGCTTTAATTAACTCTAATATCACACGTATTCAGTCTCGACTGTCACCCGCATCACGCGTGGCGTTCTGCACCAATATCCTCCTCGGCTCCTCTCAGCTAGAGAGAGATGGTGTTCCAAGTTCATGATCACAATTTCATGCATCTTAAATTGGGGATGGATGGCCTGTAAGCAGTGGCATGATATTAAATGTGAGTAAATTATCTTAATGCATTTTACTAAAACCCATATTAAATGATGGCTGTATAAACGGCCGTTTTACAGCACGAGCAATGATAGGAACAACAATTATGGTTGCTGCAGCAAGCGTGGTGTCATTTTAATTTTCGGAGAAGGGAACCGACTGGAAGTTTGGGATAAACCGGGCATTTTGGTTATTGTGTACTTCTGACCATGTCTGCATGGATGGGTTTTTCCATTTAACGTTTTTGGGCCTCACAATTCACATATCTGAAATTCAGAGATTGTGAGCATGAAGACATAAAACTTAGTTTTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000046_02365658_02365816.mRNA True 529 mRNA 0.42 1 2365658 2366186

Neighbor

gene id symbol gene type direction distance location
CI01000046_02356713_02359204 NA coding upstream 5649 2356654 ~ 2360009 (+)
CI01000046_02335530_02348525 NA coding upstream 16713 2333974 ~ 2348945 (+)
CI01000046_02264732_02268319 UNCX coding upstream 97020 2264572 ~ 2268638 (+)
CI01000046_02123765_02158243 AXIN1 coding upstream 207415 2123765 ~ 2158243 (+)
CI01000046_02066859_02072868 NA coding upstream 292644 2066859 ~ 2073014 (+)
CI01000046_02451052_02454565 MAFK coding downstream 84866 2442395 ~ 2457280 (+)
CI01000046_02616123_02661535 NA coding downstream 249861 2616047 ~ 2661964 (+)
CI01000046_02674254_02676647 ELFN1, ELFN1A coding downstream 307874 2674060 ~ 2676801 (+)
CI01000046_02794245_02796188 NA coding downstream 427693 2793879 ~ 2797088 (+)
CI01000046_02868880_02871348 NUDT1, 8ODP coding downstream 502694 2868880 ~ 2871611 (+)
G196177 NA non-coding upstream 63580 2301855 ~ 2302078 (+)
G196176 NA non-coding upstream 63862 2301426 ~ 2301796 (+)
G196164 NA non-coding upstream 81892 2283538 ~ 2283766 (+)
G196156 NA non-coding upstream 101596 2263831 ~ 2264062 (+)
G196155 NA non-coding upstream 102283 2263141 ~ 2263375 (+)
G196209 NA non-coding downstream 19564 2385750 ~ 2386244 (+)
G196107 NA non-coding downstream 71664 2437850 ~ 2481044 (+)
G196122 NA non-coding downstream 271812 2637998 ~ 2689802 (+)
G196123 NA non-coding downstream 283102 2649288 ~ 2749966 (+)
CI01000046_01865451_01881353 NA other upstream 406510 1865451 ~ 1881369 (+)
CI01000046_01540075_01668012 HS3ST4 other upstream 802321 1539494 ~ 1668012 (+)
G195003 NA other upstream 1203968 1161157 ~ 1161690 (+)
G194721 NA other upstream 1905313 458008 ~ 460345 (+)
G196936 NA other downstream 820809 3186995 ~ 3194271 (+)
CI01000046_03943890_03945302 ATP5J2 other downstream 1577642 3943794 ~ 3945500 (+)
G197055 NA other downstream 1783237 4149423 ~ 4149780 (+)
G197121 NA other downstream 2004825 4371011 ~ 4371430 (+)

Expression


Co-expression Network