CI01000046_02616123_02661535


Basic Information

Item Value
gene id CI01000046_02616123_02661535
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 2616047 ~ 2661964 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000046_02616123_02661535.mRNA
GTTTAAATGGGCAGGAATTAAAGCATGAAAGAGCTGAGAGATAGTGCTCTCAGACCCGTAACCTTAGAGATGGAGCATGGGAGAGAGCTGCCTGGTGCGCTTACAGGGCAACAGCATGTACGCCACACATTACGGAAGAAAACACCCTCATAAATTGCGTTTGATTGACAAGATGAACTGCCGTGTTAATCGTAAATTCATCAATGGCACGACAAAGTCTTTTGTTGATGGCGATTTTCTGCAATTCATCAAAATGGCAGACATAGATCAAATGCCATCTGTATTCTTTATGGACTGTAATGAATCAATTAGCATTGTGGATTTTCGAAAACCTGATCAGCAGCGTGGAGGTTGGCTTAAACCATATGTCAAAGGAGCCACACTCAAACGCAGGCTCTTGCATCACTGCGGCAAATCGAAAGTGGACCATGGCGGGGCTATTTTTGCCCACATACCCATGTGTAGCCTCCTTCACTTGTCAGCAGCTGAGCAGAGACTATCAATCAGAGCTGAGCGGCAGACCATATGGGGTCTGATCTCCTGTGGGCACCGGCCCATCCATGGCTCTCCTTGTCATGCTTATATCACATATAGGTCAGGGTCTTCTCACAACTGCAAACAGAGGGACAGGCCAGCTACTGATGGTGGATCTCAGACATGCATGCGATCACTAGACAGTTTAACCGGGGGAACAACAGAAAAAGCCATCACTGCTCTGCATGCTCGCCAATGCGAAATGTCACCCAGACCAGGGAGCAGCTGTGCGCTCCCAGAGGAGGCTCCGTCTGGCTTGAAGACCCTGACTGTTCTGGCCTACAGCACACATGGCCTCCGCTGGACCATGGAGACTCAGGCTATTAATGAGGAATGGACAGAGGAGAAAGCAGAGCTAAGAAGGGTCCCTACAGACACTATTTCCATTTGTTTATGTAGCTCATTTAAGTGTGGAATACAGGCTTCCTCAACAACACATGCCCCATGTTGTTAATGGAATCATTTATATTAATATTTGCAAGAGATTCAGTATGTTTTTAAGGAGCTTGGGGCCAAATGCAAGCAAAATCATGAGTAACAAAATTTGAATATAAATGATGGCTTATGCAGATCATCTGTGTCCATTGCAAACATACTTCAGTGTTTACTCTAACAAGTTCGGCGGCTCATCTGTAATGTATGCCGACACTTTGCGGTAAAATCAGTCTAACTGGAGTGAGTCAGGCTGGACAAACAGCATGTCTATGTTATATTAATGAGCCAAGTCTCTATTGGTTTACTCAGAACTTACCTAGAGGACTAAAGGCCTCCGTATCCTGCTGGCTGTGGTTATGCACGCTCTTGGCCTTTGCCATTTTGTTGCTTTAAAGGTCATGGACTTGGGAGAATGGACTGCAGAATGGAGTCTGTTTTCTTATGCCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000046_02616123_02661535.mRNA True 1417 mRNA 0.46 8 2616047 2661964

Neighbor

gene id symbol gene type direction distance location
CI01000046_02451052_02454565 MAFK coding upstream 161376 2442395 ~ 2457280 (+)
CI01000046_02365658_02365816 NA coding upstream 249861 2365658 ~ 2366186 (+)
CI01000046_02356713_02359204 NA coding upstream 256038 2356654 ~ 2360009 (+)
CI01000046_02335530_02348525 NA coding upstream 267102 2333974 ~ 2348945 (+)
CI01000046_02264732_02268319 UNCX coding upstream 347409 2264572 ~ 2268638 (+)
CI01000046_02674254_02676647 ELFN1, ELFN1A coding downstream 12096 2674060 ~ 2676801 (+)
CI01000046_02794245_02796188 NA coding downstream 131915 2793879 ~ 2797088 (+)
CI01000046_02868880_02871348 NUDT1, 8ODP coding downstream 206916 2868880 ~ 2871611 (+)
CI01000046_02911888_02930362 NA coding downstream 249181 2911145 ~ 2930993 (+)
CI01000046_02933552_02949246 NA coding downstream 271523 2933487 ~ 2949318 (+)
G196107 NA non-coding upstream 135003 2437850 ~ 2481044 (+)
G196209 NA non-coding upstream 229803 2385750 ~ 2386244 (+)
G196177 NA non-coding upstream 313969 2301855 ~ 2302078 (+)
G196176 NA non-coding upstream 314251 2301426 ~ 2301796 (+)
G196687 NA non-coding downstream 102904 2764868 ~ 2765242 (+)
G196691 NA non-coding downstream 113407 2775371 ~ 2775660 (+)
G196703 NA non-coding downstream 129997 2791961 ~ 2792212 (+)
G196698 NA non-coding downstream 132406 2794370 ~ 2873461 (+)
G196744 NA non-coding downstream 279184 2941148 ~ 2941489 (+)
CI01000046_01865451_01881353 NA other upstream 656899 1865451 ~ 1881369 (+)
CI01000046_01540075_01668012 HS3ST4 other upstream 1052710 1539494 ~ 1668012 (+)
G195003 NA other upstream 1454357 1161157 ~ 1161690 (+)
G194721 NA other upstream 2155702 458008 ~ 460345 (+)
G196936 NA other downstream 525031 3186995 ~ 3194271 (+)
CI01000046_03943890_03945302 ATP5J2 other downstream 1281864 3943794 ~ 3945500 (+)
G197055 NA other downstream 1487459 4149423 ~ 4149780 (+)
G197121 NA other downstream 1709047 4371011 ~ 4371430 (+)
G196869 NA other downstream 1753566 4415530 ~ 4421687 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location