CI01000046_02794245_02796188


Basic Information

Item Value
gene id CI01000046_02794245_02796188
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 2793879 ~ 2797088 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000046_02794245_02796188.mRNA
GCATAAAAAAAAGCATACTTCACAGATTCCAGGTCCTTCTTATAAAACATTACATAAACTTAACTGATTTTATTTTCTTCTTTTGAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAAAAAAGAAAAAGAAAAAACCTGTTCCTGGAGTTCTACCTACCCGCAGAGTTCAGATACAACCCTGATCCAGCATACATGTCATGTAATTCTCAAGTGCTCCCATGGATCTTAGTTAGCTGGTTCAATTTTGTTTGATCACGGTTGGAGCTGAACTTTGCAGGAAGGTATATTAGGTAAAGTATATCAGGACTCAGTAGTCTGCTGGATCCTCCACATTCTACAAAAAATCGGCCTACAAAGTGAGGAATTATGTCTTGCGTATTGCAAGCAGCAGTTTGCACAGCATGTGCAAATAAACGACACTATCAGCAGTTCTGGCTGAAGCCGCAGGTCTCGCCCCAAGCCTGGCAACATGATCGCTGCTCGCTCAAGGTGAACAAGAGGAAGGTCGTCTTCACAGATGCCTCCAAAATGGGTTGGGGAGCTCTGTGCGACAGCCATCCGGCCTTCGGCACTTGGAACGGCAAGGAAAGCGAGCTTCATATCAACCGTCTGGAAATGATGGTGGTATATCAAGCTCTCCAAACTTTCCTTCCTCTCCTGGTGGGGCACCATGTCTTAGTCAGATCAGACAGCATGACAGTGGGGTCCTTCATAAATCACCAGGGCGGGCTCTCTTCAAAGCCCCTCTTCACTCTAGCGAAAACCATCCTAGAGTGGGCCCAACACAATCTGCTCTCACTGAGAGCAGCGCATATACAGGGCGTACTGAACATAGGGGTGGACATGTTGTCCCGGAACAACCTTCCCTCGAAAGAATGGTCGCTCCATTGATTTCTCAATGGGAGCCTGCAAACCTCCCTGGGAATGTAGTAAACACTATCTCACAAGCTAGAGCTCCGTCAACAAGACGTCTCTACTCCCTTAAATGGTCCGTCTTTGCTGCCTGGTGCACAACCCGGGGCGAGGATCCATTTACTTGTGACATATCACAGATATTGTCCTTCCTTCAAGACTTAATGGATAGAGGCCGTACTCCCTCTACCCTTAAGGTCTATGTCGCAGCTATAGCGGCCTCTCATGCTCCTATAGCAGGGCAGTCGAAAGGGAGAAACAACCTTGTTGTTTGCTTCCTACCTGGGACCTATCCTTGGTTCTTAGAGGCCTTAAAGGCCCTCCCTTTGAACCAATCCAGACTGCCGACTTACGTCCCTTGTCACTAAAAACAGCCTTACTGCTAGCTTTAGCATCGGTTAAGCATGTGGGAGATTTGCAGGCGCTCGCTGTGAGCCCCTCTTGTCTTGAATTCGGGCCTAACGACTCCAAAGTCGTCCTGAAACCAAGATATGGATACGTCCCGAAGGTCCTATCCACCCCCTTTAGGGCGCAGATGGTCATTCTCTCCGTTCTTCCTCCTTCTCAGGATGATCAGGAGTTGAACCTCCTCTATCCTGTTGTATATCGACATGAAATATTAATTCAAAATCACCTACGTGCACAATAGCTTCATATTTATACCTGTAAATGATTTGACTCGCTACCACGGCGCATGATGAAGGGAATGTCTGCCAGTTCCACCAAGTGGTTAAAACGAATGATTTGTATTCATTACAATGACTTTGTTTTAACATTTAAAAACAGATATGTTCAAATTCCAAAGCTTGATAGTTCCTGTTGGTAAGACTGACTTACTACAGGTGACATTTTGTCAATACCTCCCTTCATGTACTTACA

Function

NR:

description
lambda-recombinase-like protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000046_02794245_02796188.mRNA True 1791 mRNA 0.46 2 2793879 2797088

Neighbor

gene id symbol gene type direction distance location
CI01000046_02674254_02676647 ELFN1, ELFN1A coding upstream 117078 2674060 ~ 2676801 (+)
CI01000046_02616123_02661535 NA coding upstream 131915 2616047 ~ 2661964 (+)
CI01000046_02451052_02454565 MAFK coding upstream 339208 2442395 ~ 2457280 (+)
CI01000046_02365658_02365816 NA coding upstream 427693 2365658 ~ 2366186 (+)
CI01000046_02356713_02359204 NA coding upstream 433870 2356654 ~ 2360009 (+)
CI01000046_02868880_02871348 NUDT1, 8ODP coding downstream 71792 2868880 ~ 2871611 (+)
CI01000046_02911888_02930362 NA coding downstream 114057 2911145 ~ 2930993 (+)
CI01000046_02933552_02949246 NA coding downstream 136399 2933487 ~ 2949318 (+)
CI01000046_02981176_03006650 NA coding downstream 183739 2980827 ~ 3006675 (+)
CI01000046_03041320_03042564 GRIFIN coding downstream 244232 3041320 ~ 3042750 (+)
G196703 NA non-coding upstream 1667 2791961 ~ 2792212 (+)
G196691 NA non-coding upstream 18219 2775371 ~ 2775660 (+)
G196687 NA non-coding upstream 28637 2764868 ~ 2765242 (+)
G196123 NA non-coding upstream 43913 2649288 ~ 2749966 (+)
G196122 NA non-coding upstream 104077 2637998 ~ 2689802 (+)
G196744 NA non-coding downstream 144060 2941148 ~ 2941489 (+)
G196749 NA non-coding downstream 169100 2966188 ~ 2966536 (+)
G196754 NA non-coding downstream 184490 2981578 ~ 2981812 (+)
G196757 NA non-coding downstream 193076 2990164 ~ 2990436 (+)
G196773 NA non-coding downstream 219377 3016465 ~ 3016713 (+)
CI01000046_01865451_01881353 NA other upstream 834731 1865451 ~ 1881369 (+)
CI01000046_01540075_01668012 HS3ST4 other upstream 1230542 1539494 ~ 1668012 (+)
G195003 NA other upstream 1632189 1161157 ~ 1161690 (+)
G194721 NA other upstream 2333534 458008 ~ 460345 (+)
G196936 NA other downstream 389907 3186995 ~ 3194271 (+)
CI01000046_03943890_03945302 ATP5J2 other downstream 1146740 3943794 ~ 3945500 (+)
G197055 NA other downstream 1352335 4149423 ~ 4149780 (+)
G197121 NA other downstream 1573923 4371011 ~ 4371430 (+)
G196869 NA other downstream 1618442 4415530 ~ 4421687 (+)

Expression


Co-expression Network